RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 COPB1P53618 953 aaKnown RBP14.67□□□□□ -0.06
VRK3-219ENST00000600137 PSMC1P62191 440 aaKnown RBP14.67□□□□□ -0.06
VRK3-219ENST00000600137 CUL2Q13617 745 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 WDR44Q5JSH3 913 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 RARS2Q5T160 578 aaKnown RBP14.67□□□□□ -0.06
VRK3-219ENST00000600137 LRSAM1Q6UWE0 723 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 TMC5Q6UXY8 1006 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 UNC93AQ86WB7 457 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 DCP1BQ8IZD4 617 aaKnown RBP14.67□□□□□ -0.06
VRK3-219ENST00000600137 SLC7A14Q8TBB6 771 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 KREMEN1Q96MU8 473 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 PRKD2Q9BZL6 878 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 IMPG2Q9BZV3 1241 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 ELOVL4Q9GZR5 314 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 INTS2Q9H0H0 1204 aaKnown RBP14.67□□□□□ -0.06
VRK3-219ENST00000600137 VPS16Q9H269 839 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 SNX25Q9H3E2 840 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 SFXN1Q9H9B4 322 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 CYP4F11Q9HBI6 524 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 TMEM30AQ9NV96 361 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 ZDHHC7Q9NXF8 308 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 HSFX1Q9UBD0 423 aa14.67□□□□□ -0.06
VRK3-219ENST00000600137 MAGEC2Q9UBF1 373 aaPredicted RBP14.67□□□□□ -0.06
VRK3-219ENST00000600137 SMTNL1A8MU46 457 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 RNF225M0QZC1 329 aaPredicted RBP14.66□□□□□ -0.06
VRK3-219ENST00000600137 POU2F2P09086 479 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 HAPLN1P10915 354 aaPredicted RBP14.66□□□□□ -0.06
VRK3-219ENST00000600137 PRKCSHP14314 528 aaPredicted RBP14.66□□□□□ -0.06
VRK3-219ENST00000600137 ZNF445P59923 1031 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 TSPY1Q01534 308 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 ITIH3Q06033 890 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 SMARCB1Q12824 385 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 SMAD4Q13485 552 aaKnown RBP14.66□□□□□ -0.06
VRK3-219ENST00000600137 TRIM65Q6PJ69 517 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 GBP6Q6ZN66 633 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 LUZP1Q86V48 1076 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 MYCBPAPQ8TBZ2 947 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 SPPL2BQ8TCT7 592 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 ATXN2LQ8WWM7 1075 aaKnown RBP14.66□□□□□ -0.06
VRK3-219ENST00000600137 NT5C1BQ96P26 610 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 B3GNT5Q9BYG0 378 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 FAM124BQ9H5Z6 455 aaPredicted RBP14.66□□□□□ -0.06
VRK3-219ENST00000600137 CISHQ9NSE2 258 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 GCNT4Q9P109 453 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 CEP72Q9P209 647 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 DPP7Q9UHL4 492 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 AJAP1Q9UKB5 411 aaPredicted RBP14.66□□□□□ -0.06
VRK3-219ENST00000600137 USP15Q9Y4E8 981 aaPredicted RBP14.66□□□□□ -0.06
VRK3-219ENST00000600137 INSL5Q9Y5Q6 135 aa14.66□□□□□ -0.06
VRK3-219ENST00000600137 SOAT2O75908 522 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 CAVIN2O95810 425 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 HNRNPA1P09651 372 aaKnown RBP eCLIP14.65□□□□□ -0.06
VRK3-219ENST00000600137 SRGAP2BP0DMP2 458 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 CD58P19256 250 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 CYP2F1P24903 491 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 CACNA2D1P54289 1103 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 RAD23BP54727 409 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 GCNT1Q02742 428 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 CETN1Q12798 172 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 ORC1Q13415 861 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 SMAD2Q15796 467 aaKnown RBP14.65□□□□□ -0.06
VRK3-219ENST00000600137 NFE2Q16621 373 aaPredicted RBP14.65□□□□□ -0.06
VRK3-219ENST00000600137 EXOC3L4Q17RC7 722 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 CFAP221Q4G0U5 840 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 GJB7Q6PEY0 223 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 POTEHQ6S545 545 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 CCDC149Q6ZUS6 474 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 RRAGAQ7L523 313 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 ACOT1Q86TX2 421 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 C12orf29Q8N999 325 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 SLC4A11Q8NBS3 891 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 B3GALNT2Q8NCR0 500 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 CCDC150Q8NCX0 1101 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 C2orf15Q8WU43 125 aaKnown RBP14.65□□□□□ -0.06
VRK3-219ENST00000600137 MYLPFQ96A32 169 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 PCED1BQ96HM7 432 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 ASB2Q96Q27 587 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 LRRC3Q9BY71 257 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 CNTN6Q9UQ52 1028 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 YIPF1Q9Y548 306 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 PCDHB5Q9Y5E4 795 aa14.65□□□□□ -0.06
VRK3-219ENST00000600137 TCF20Q9UGU0 1960 aaKnown RBP14.65□□□□□ -0.06
VRK3-219ENST00000600137 GREB1Q4ZG55 1949 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 DENND4AQ7Z401 1863 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 NRG2O14511 850 aaPredicted RBP14.64□□□□□ -0.07
VRK3-219ENST00000600137 CCL16O15467 120 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 IL9P15248 144 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 ATF6P18850 670 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 ELF1P32519 619 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 MRPS5P82675 430 aaKnown RBP14.64□□□□□ -0.07
VRK3-219ENST00000600137 MDH1BQ5I0G3 518 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 PPM1LQ5SGD2 360 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 LIN9Q5TKA1 542 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 PTCRAQ6ISU1 281 aaPredicted RBP14.64□□□□□ -0.07
VRK3-219ENST00000600137 CYP26C1Q6V0L0 522 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 FUKQ8N0W3 1084 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 FAM200AQ8TCP9 573 aa14.64□□□□□ -0.07
VRK3-219ENST00000600137 FUBP3Q96I24 572 aaKnown RBP eCLIP14.64□□□□□ -0.07
VRK3-219ENST00000600137 NAP1L5Q96NT1 182 aaPredicted RBP14.64□□□□□ -0.07
VRK3-219ENST00000600137 NT5C1AQ9BXI3 368 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms