RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 C8AP07357 584 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 PDGFRBP09619 1106 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 SLC9A1P19634 815 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 UBXN1Q04323 297 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 PHLDB3Q6NSJ2 640 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 CES5AQ6NT32 575 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 LLGL2Q6P1M3 1020 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 LRRTM3Q86VH5 581 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 SPATA2LQ8IUW3 424 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 PPM1EQ8WY54 764 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 ADAM7Q9H2U9 754 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 CYP4F11Q9HBI6 524 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 UBE2TQ9NPD8 197 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 RTN4Q9NQC3 1192 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 GTF3C4Q9UKN8 822 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 CNTN6Q9UQ52 1028 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 ASB3Q9Y575 518 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 ATP8B3O60423 1300 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 MYO7AQ13402 2215 aa17.64■□□□□ 0.41
SHKBP1-219ENST00000599575 A0A1W2PQC6 194 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 LINC01565O15544 149 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 TBX10O75333 385 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 PAEPP09466 180 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 ACAT1P24752 427 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 RAP1GAPP47736 663 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 RPL10AP62906 217 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 LRMPQ12912 555 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 LEXMQ3ZCV2 418 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 PPM1LQ5SGD2 360 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 UBR7Q8N806 425 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 SMRP1Q8NCR6 262 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 SLC7A14Q8TBB6 771 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 TMEM176AQ96HP8 235 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 NECTIN4Q96NY8 510 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 TMEM209Q96SK2 561 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 PRKD2Q9BZL6 878 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 ELOVL4Q9GZR5 314 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 CRTAC1Q9NQ79 661 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 CD207Q9UJ71 328 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 TSC2P49815 1807 aa17.63■□□□□ 0.41
SHKBP1-219ENST00000599575 MYBPHLA2RUH7 354 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 LRG1P02750 347 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 OR4Q2P0C623 313 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 CD58P19256 250 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 ACO1P21399 889 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 ALDH1A3P47895 512 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 KCNMA1Q12791 1236 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 DUSP4Q13115 394 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 KLHDC7AQ5VTJ3 777 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 SYCE2Q6PIF2 218 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 EP400NLQ6ZTU2 488 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 FMNL3Q8IVF7 1028 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 ELMOD1Q8N336 334 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 ATAD1Q8NBU5 361 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 LEMD2Q8NC56 503 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 WHAMMQ8TF30 809 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 ATXN2LQ8WWM7 1075 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 PCED1BQ96HM7 432 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 RIPOR3Q96MK2 946 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 ARID3AQ99856 593 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 THEGQ9P2T0 379 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 INSL5Q9Y5Q6 135 aa17.62■□□□□ 0.41
SHKBP1-219ENST00000599575 SPATA31D3P0C874 917 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 HAPLN1P10915 354 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 UCHL3P15374 230 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 KCNA5P22460 613 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 MTHFRP42898 656 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 EPHB3P54753 998 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 PSMC1P62191 440 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 FANCCQ00597 558 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 SMAD4Q13485 552 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 STILQ15468 1287 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 MDH1BQ5I0G3 518 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 ATAT1Q5SQI0 421 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 SPATA31D4Q6ZUB0 917 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 RRAGAQ7L523 313 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 GPR149Q86SP6 731 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 ACOT1Q86TX2 421 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 ITIH5Q86UX2 942 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 ARHGEF19Q8IW93 802 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 SHC3Q92529 594 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 ELMO3Q96BJ8 720 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 IQCDQ96DY2 449 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 PGLYRP2Q96PD5 576 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 HNRNPABQ99729 332 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 S1PR5Q9H228 398 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 SIX2Q9NPC8 291 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 ABI2Q9NYB9 513 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 EHD2Q9NZN4 543 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 CEP72Q9P209 647 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 SIK3Q9Y2K2 1263 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 NME7Q9Y5B8 376 aa17.61■□□□□ 0.41
SHKBP1-219ENST00000599575 ATG2AQ2TAZ0 1938 aa17.6■□□□□ 0.41
SHKBP1-219ENST00000599575 CCDC195A0A1B0GUA6 201 aa17.6■□□□□ 0.41
SHKBP1-219ENST00000599575 TRIM66O15016 1216 aa17.6■□□□□ 0.41
SHKBP1-219ENST00000599575 CBFA2T2O43439 604 aa17.6■□□□□ 0.41
SHKBP1-219ENST00000599575 ATP2C2O75185 946 aa17.6■□□□□ 0.41
SHKBP1-219ENST00000599575 SEC24AO95486 1093 aa17.6■□□□□ 0.41
SHKBP1-219ENST00000599575 VNN2O95498 520 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms