RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 NT5C1B-RDH14C9J2C7 533 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 H3BNC9 293 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 GABRDO14764 452 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 ZNF263O14978 683 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 THAP12O43422 761 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 LCA5LO95447 670 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 CYP11A1P05108 521 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 MMEP08473 750 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 PDGFRBP09619 1106 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 VDRP11473 427 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 ODC1P11926 461 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 LMO2P25791 158 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 ANXA13P27216 316 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 LHX1P48742 406 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 FMO1Q01740 532 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 ORC1Q13415 861 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 BTG3Q14201 252 aaPredicted RBP12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 SPA17Q15506 151 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 SLC18A3Q16572 532 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 VPS36Q86VN1 386 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 ZSCAN30Q86W11 494 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 METTL23Q86XA0 190 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 CRYBG2Q8N1P7 616 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 ACRBPQ8NEB7 543 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 SPATA18Q8TC71 538 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 TFAP2BQ92481 460 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 HEXIM2Q96MH2 286 aaKnown RBP12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 NECAB3Q96P71 396 aaPredicted RBP12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 PCDHB18PQ96TA0 734 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 ZSWIM1Q9BR11 485 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 DESI2Q9BSY9 194 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 UBE2ZQ9H832 354 aaPredicted RBP12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 MARCH5Q9NX47 278 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 HMGXB4Q9UGU5 601 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 PUF60Q9UHX1 559 aaKnown RBP12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 KIAA1257Q9ULG3 409 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 PCDHB8Q9UN66 801 aa12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 REXO2Q9Y3B8 237 aaKnown RBP12.2□□□□□ -0.46
SH2D3A-206ENST00000597254 COL4A6Q14031 1691 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 NLRC5Q86WI3 1866 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 ARHGEF37A1IGU5 675 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 HCRTO43612 131 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 TRAPPC3O43617 180 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 RB1P06400 928 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 CD19P15391 556 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 TYMPP19971 482 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 BRD2P25440 801 aaKnown RBP12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 BMPR1AP36894 532 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 MAGEA1P43355 309 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 ALDH7A1P49419 539 aaKnown RBP12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 KRT83P78385 493 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 CYP27A1Q02318 531 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 CCDC122Q5T0U0 273 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 SPOUT1Q5T280 376 aaKnown RBP12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 ALKBH5Q6P6C2 394 aaKnown RBP12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 ACOT1Q86TX2 421 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 GLYCTKQ8IVS8 523 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 C11orf84Q9BUA3 381 aaPredicted RBP12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 SEPT11Q9NVA2 429 aaKnown RBP12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 DDX43Q9NXZ2 648 aaKnown RBP12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 NAGPAQ9UK23 515 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 ADAM28Q9UKQ2 775 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 DSEQ9UL01 958 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 NENFQ9UMX5 172 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 PPP2R2CQ9Y2T4 447 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 PCDHA13Q9Y5I0 950 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 BDP1A6H8Y1 2624 aa12.19□□□□□ -0.46
SH2D3A-206ENST00000597254 MED7O43513 233 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 IPO7O95373 1038 aaKnown RBP12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 CFHP08603 1231 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 CCDC175P0C221 793 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 KCNA5P22460 613 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 PBX3P40426 434 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 CNGA2Q16280 664 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 SGO2Q562F6 1265 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 KCNT2Q6UVM3 1135 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 EP400NLQ6ZTU2 488 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 REXO1L1PQ8IX06 675 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 THEM5Q8N1Q8 247 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 CYFIP2Q96F07 1278 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 GPR62Q9BZJ7 368 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 DNAI2Q9GZS0 605 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 PDCL3Q9H2J4 239 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 DPEP3Q9H4B8 488 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 KCND1Q9NSA2 647 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 TRMT1Q9NXH9 659 aaKnown RBP12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 PCDHGC3Q9UN70 934 aa12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 MRPL42Q9Y6G3 142 aaKnown RBP12.18□□□□□ -0.46
SH2D3A-206ENST00000597254 REV3LO60673 3130 aa12.17□□□□□ -0.46
SH2D3A-206ENST00000597254 C5orf67F2Z3F1 127 aa12.17□□□□□ -0.46
SH2D3A-206ENST00000597254 SYN3O14994 580 aa12.17□□□□□ -0.46
SH2D3A-206ENST00000597254 ZSCAN12O43309 604 aa12.17□□□□□ -0.46
SH2D3A-206ENST00000597254 ATP2C2O75185 946 aa12.17□□□□□ -0.46
SH2D3A-206ENST00000597254 CYP1A1P04798 512 aaPredicted RBP12.17□□□□□ -0.46
SH2D3A-206ENST00000597254 GZMAP12544 262 aa12.17□□□□□ -0.46
SH2D3A-206ENST00000597254 UNGP13051 313 aaPredicted RBP12.17□□□□□ -0.46
SH2D3A-206ENST00000597254 PTPN1P18031 435 aaKnown RBP12.17□□□□□ -0.46
SH2D3A-206ENST00000597254 LAG3P18627 525 aa12.17□□□□□ -0.46
SH2D3A-206ENST00000597254 ACAT1P24752 427 aaKnown RBP12.17□□□□□ -0.46
SH2D3A-206ENST00000597254 MSNP26038 577 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms