RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 TACC1O75410 805 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 ADCY1Q08828 1119 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 CBWD6Q4V339 395 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 CBWD3Q5JTY5 395 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 CBWD5Q5RIA9 395 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 OSTM1Q86WC4 334 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 TRIM59Q8IWR1 403 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 TCEAL8Q8IYN2 117 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 SLC7A14Q8TBB6 771 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 KBTBD7Q8WVZ9 684 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 POLIQ9UNA4 740 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 PRRG1O14668 218 aa20.95■□□□□ 0.94
LSM4-203ENST00000593829 WARSP23381 471 aaKnown RBP20.95■□□□□ 0.94
LSM4-203ENST00000593829 PCSK1P29120 753 aa20.95■□□□□ 0.94
LSM4-203ENST00000593829 TSPY1Q01534 308 aa20.95■□□□□ 0.94
LSM4-203ENST00000593829 SMAD2Q15796 467 aaKnown RBP20.95■□□□□ 0.94
LSM4-203ENST00000593829 PPM1LQ5SGD2 360 aa20.95■□□□□ 0.94
LSM4-203ENST00000593829 GPR149Q86SP6 731 aa20.95■□□□□ 0.94
LSM4-203ENST00000593829 DCP1BQ8IZD4 617 aaKnown RBP20.95■□□□□ 0.94
LSM4-203ENST00000593829 SUSD6Q92537 303 aa20.95■□□□□ 0.94
LSM4-203ENST00000593829 ELMO3Q96BJ8 720 aa20.95■□□□□ 0.94
LSM4-203ENST00000593829 SNX25Q9H3E2 840 aa20.95■□□□□ 0.94
LSM4-203ENST00000593829 CYP4F11Q9HBI6 524 aa20.95■□□□□ 0.94
LSM4-203ENST00000593829 TRMT1Q9NXH9 659 aaKnown RBP20.95■□□□□ 0.94
LSM4-203ENST00000593829 MTCL1Q9Y4B5 1905 aaKnown RBP20.95■□□□□ 0.94
LSM4-203ENST00000593829 PAPLNO95428 1278 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 HNRNPA1P09651 372 aaKnown RBP eCLIP20.94■□□□□ 0.94
LSM4-203ENST00000593829 HOXA9P31269 272 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 SMARCB1Q12824 385 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 ELF2Q15723 593 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 SLC39A12Q504Y0 691 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 ATAT1Q5SQI0 421 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 CYP26C1Q6V0L0 522 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 CNOT6LQ96LI5 555 aaKnown RBP20.94■□□□□ 0.94
LSM4-203ENST00000593829 RIPOR3Q96MK2 946 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 PGLYRP2Q96PD5 576 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 MRPL45Q9BRJ2 306 aaKnown RBP20.94■□□□□ 0.94
LSM4-203ENST00000593829 PI4K2AQ9BTU6 479 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 PRKD2Q9BZL6 878 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 THAP9Q9H5L6 903 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 RAB20Q9NX57 234 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.94■□□□□ 0.94
LSM4-203ENST00000593829 IL9P15248 144 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 MTHFRP42898 656 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 FMO5P49326 533 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 NOP14P78316 857 aaKnown RBP20.94■□□□□ 0.94
LSM4-203ENST00000593829 SPOPLQ6IQ16 392 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 SEMA4DQ92854 862 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 NECTIN4Q96NY8 510 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 RHOBTB2Q9BYZ6 727 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 XPO4Q9C0E2 1151 aaKnown RBP20.94■□□□□ 0.94
LSM4-203ENST00000593829 SMYD3Q9H7B4 428 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.94■□□□□ 0.941e-9■■■■■ 59.3
LSM4-203ENST00000593829 COQ4Q9Y3A0 265 aa20.94■□□□□ 0.94
LSM4-203ENST00000593829 N4BP1O75113 896 aaKnown RBP20.93■□□□□ 0.94
LSM4-203ENST00000593829 SEC24AO95486 1093 aa20.93■□□□□ 0.94
LSM4-203ENST00000593829 WEE2P0C1S8 567 aa20.93■□□□□ 0.94
LSM4-203ENST00000593829 ACAT1P24752 427 aaKnown RBP20.93■□□□□ 0.94
LSM4-203ENST00000593829 GNL1P36915 607 aaPredicted RBP20.93■□□□□ 0.94
LSM4-203ENST00000593829 CBX2Q14781 532 aaPredicted RBP20.93■□□□□ 0.94
LSM4-203ENST00000593829 NCAPHQ15003 741 aa20.93■□□□□ 0.94
LSM4-203ENST00000593829 SCARA5Q6ZMJ2 495 aa20.93■□□□□ 0.94
LSM4-203ENST00000593829 LRRTM3Q86VH5 581 aa20.93■□□□□ 0.94
LSM4-203ENST00000593829 IRF2BP1Q8IU81 584 aa20.93■□□□□ 0.94
LSM4-203ENST00000593829 FAM114A1Q8IWE2 563 aa20.93■□□□□ 0.94
LSM4-203ENST00000593829 OR6B3Q8NGW1 331 aa20.93■□□□□ 0.94
LSM4-203ENST00000593829 ZNF707Q96C28 371 aaPredicted RBP20.93■□□□□ 0.94
LSM4-203ENST00000593829 MTMR11A4FU01 709 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 PMM2O15305 246 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 LMO2P25791 158 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 CDH8P55286 799 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 WDR44Q5JSH3 913 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 INTS6LQ5JSJ4 861 aaKnown RBP20.92■□□□□ 0.94
LSM4-203ENST00000593829 ENOX1Q8TC92 643 aaKnown RBP20.92■□□□□ 0.94
LSM4-203ENST00000593829 C2orf15Q8WU43 125 aaKnown RBP20.92■□□□□ 0.94
LSM4-203ENST00000593829 SMG7Q92540 1137 aaKnown RBP20.92■□□□□ 0.94
LSM4-203ENST00000593829 APOBEC3GQ9HC16 384 aaKnown RBP20.92■□□□□ 0.94
LSM4-203ENST00000593829 CDH22Q9UJ99 828 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 CDH9Q9ULB4 789 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 HCRTO43612 131 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 XYLBO75191 536 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 VNN2O95498 520 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 PDGFRBP09619 1106 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 CETN1Q12798 172 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 KCNH2Q12809 1159 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 DUSP4Q13115 394 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 NFE2Q16621 373 aaPredicted RBP20.92■□□□□ 0.94
LSM4-203ENST00000593829 ATAD1Q8NBU5 361 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 FEZF2Q8TBJ5 459 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 SYT15Q9BQS2 421 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 PIDD1Q9HB75 910 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 IFNKQ9P0W0 207 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 INSL5Q9Y5Q6 135 aa20.92■□□□□ 0.94
LSM4-203ENST00000593829 P4HA2O15460 535 aa20.91■□□□□ 0.94
LSM4-203ENST00000593829 LRRN2O75325 713 aa20.91■□□□□ 0.94
LSM4-203ENST00000593829 LRG1P02750 347 aa20.91■□□□□ 0.94
LSM4-203ENST00000593829 AFPP02771 609 aaKnown RBP20.91■□□□□ 0.94
LSM4-203ENST00000593829 ASPAP45381 313 aa20.91■□□□□ 0.94
LSM4-203ENST00000593829 TMC6Q7Z403 805 aa20.91■□□□□ 0.94
LSM4-203ENST00000593829 NIF3L1Q9GZT8 377 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms