RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 LPAL2Q16609 132 aa22.02■■□□□ 1.12
TRIM47-207ENST00000593089 RSPO4Q2I0M5 234 aaPredicted RBP22.02■■□□□ 1.12
TRIM47-207ENST00000593089 SDHAF4Q5VUM1 108 aa22.02■■□□□ 1.12
TRIM47-207ENST00000593089 TMEM150AQ86TG1 271 aa22.02■■□□□ 1.12
TRIM47-207ENST00000593089 CMTM8Q8IZV2 173 aa22.02■■□□□ 1.12
TRIM47-207ENST00000593089 SPEM1Q8N4L4 309 aa22.02■■□□□ 1.12
TRIM47-207ENST00000593089 MAB21L3Q8N8X9 362 aa22.02■■□□□ 1.12
TRIM47-207ENST00000593089 INTS4Q96HW7 963 aaKnown RBP22.02■■□□□ 1.12
TRIM47-207ENST00000593089 TMEM206Q9H813 350 aa22.02■■□□□ 1.12
TRIM47-207ENST00000593089 THG1LQ9NWX6 298 aaKnown RBP22.02■■□□□ 1.12
TRIM47-207ENST00000593089 ITGA11Q9UKX5 1188 aa22.02■■□□□ 1.12
TRIM47-207ENST00000593089 MORC2Q9Y6X9 1032 aaPredicted RBP22.02■■□□□ 1.12
TRIM47-207ENST00000593089 NLRP12P59046 1061 aa22.01■■□□□ 1.11
TRIM47-207ENST00000593089 STK38Q15208 465 aa22.01■■□□□ 1.11
TRIM47-207ENST00000593089 NFE2Q16621 373 aaPredicted RBP22.01■■□□□ 1.11
TRIM47-207ENST00000593089 DGKKQ5KSL6 1271 aa22.01■■□□□ 1.11
TRIM47-207ENST00000593089 LMBRD2Q68DH5 695 aaPredicted RBP22.01■■□□□ 1.11
TRIM47-207ENST00000593089 CCDC65Q8IXS2 484 aa22.01■■□□□ 1.11
TRIM47-207ENST00000593089 GPD1LQ8N335 351 aa22.01■■□□□ 1.11
TRIM47-207ENST00000593089 GPR161Q8N6U8 529 aaKnown RBP22.01■■□□□ 1.11
TRIM47-207ENST00000593089 LRRC52Q8N7C0 313 aa22.01■■□□□ 1.11
TRIM47-207ENST00000593089 ACBD6Q9BR61 282 aa22.01■■□□□ 1.11
TRIM47-207ENST00000593089 MTMR12Q9C0I1 747 aa22.01■■□□□ 1.11
TRIM47-207ENST00000593089 ZSCAN16Q9H4T2 348 aaPredicted RBP22.01■■□□□ 1.11
TRIM47-207ENST00000593089 GMEB2Q9UKD1 530 aa22.01■■□□□ 1.11
TRIM47-207ENST00000593089 RAB23Q9ULC3 237 aa22.01■■□□□ 1.11
TRIM47-207ENST00000593089 SNX9Q9Y5X1 595 aa22.01■■□□□ 1.11
TRIM47-207ENST00000593089 STX6O43752 255 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 F11P03951 625 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 TMEM191BP0C7N4 346 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 AVPR1AP37288 418 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 MYL7Q01449 175 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 DMWDQ09019 674 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 DDR2Q16832 855 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 ITPRIPL2Q3MIP1 535 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 INTS6LQ5JSJ4 861 aaKnown RBP22■■□□□ 1.11
TRIM47-207ENST00000593089 PRR23BQ6ZRT6 265 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 TMEM86AQ8N2M4 240 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 CXorf38Q8TB03 319 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 GKN1Q9NS71 199 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 DLL3Q9NYJ7 618 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 ZMYM5Q9UJ78 669 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 USP18Q9UMW8 372 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 CCL26Q9Y258 94 aa22■■□□□ 1.11
TRIM47-207ENST00000593089 DNAH14Q0VDD8 3507 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 MED19A0JLT2 244 aaPredicted RBP21.99■■□□□ 1.11
TRIM47-207ENST00000593089 CHURC1-FNTBB4DL54 471 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 HCRTO43612 131 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 CSH1P0DML2 217 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 CSH2P0DML3 217 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 CYP2F1P24903 491 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 NASPP49321 788 aaPredicted RBP21.99■■□□□ 1.11
TRIM47-207ENST00000593089 FNTBP49356 437 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 RBP5P82980 135 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 CCDC142Q17RM4 750 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 TXNDC8Q6A555 127 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 OSTM1Q86WC4 334 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 GLIS3Q8NEA6 775 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 LEO1Q8WVC0 666 aaPredicted RBP21.99■■□□□ 1.11
TRIM47-207ENST00000593089 MRPS31Q92665 395 aaKnown RBP21.99■■□□□ 1.11
TRIM47-207ENST00000593089 HPS3Q969F9 1004 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 C2orf42Q9NWW7 574 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 SIX4Q9UIU6 781 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 GTF3C4Q9UKN8 822 aa21.99■■□□□ 1.11
TRIM47-207ENST00000593089 K7ELQ4 463 aaPredicted RBP21.98■■□□□ 1.11
TRIM47-207ENST00000593089 DDX6P26196 483 aaKnown RBP eCLIP21.98■■□□□ 1.11
TRIM47-207ENST00000593089 RPL10AP62906 217 aaKnown RBP21.98■■□□□ 1.11
TRIM47-207ENST00000593089 HEATR6Q6AI08 1181 aaKnown RBP21.98■■□□□ 1.11
TRIM47-207ENST00000593089 TRIM68Q6AZZ1 485 aa21.98■■□□□ 1.11
TRIM47-207ENST00000593089 ADGRF2Q8IZF7 708 aa21.98■■□□□ 1.11
TRIM47-207ENST00000593089 LINC00301Q8NCQ3 95 aa21.98■■□□□ 1.11
TRIM47-207ENST00000593089 USP13Q92995 863 aaPredicted RBP21.98■■□□□ 1.11
TRIM47-207ENST00000593089 ANKRD36BP1Q96IX9 119 aa21.98■■□□□ 1.11
TRIM47-207ENST00000593089 PKMYT1Q99640 499 aa21.98■■□□□ 1.11
TRIM47-207ENST00000593089 GDAP2Q9NXN4 497 aa21.98■■□□□ 1.11
TRIM47-207ENST00000593089 R3HCC1Q9Y3T6 440 aaKnown RBP21.98■■□□□ 1.11
TRIM47-207ENST00000593089 CEP250Q9BV73 2442 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 CACNA1AO00555 2505 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 K7ESF4 209 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 SRSF5Q13243 272 aaKnown RBP21.97■■□□□ 1.11
TRIM47-207ENST00000593089 CCINQ13939 588 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 SIM2Q14190 667 aaPredicted RBP21.97■■□□□ 1.11
TRIM47-207ENST00000593089 LAIR1Q6GTX8 287 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 STXBP4Q6ZWJ1 553 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 SPATA2LQ8IUW3 424 aaPredicted RBP21.97■■□□□ 1.11
TRIM47-207ENST00000593089 TOP6BLQ8N6T0 577 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 OR5B17Q8NGF7 314 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 FAM83CQ9BQN1 747 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 TNMDQ9H2S6 317 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 EBF3Q9H4W6 596 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 ABCB6Q9NP58 842 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 PARD6AQ9NPB6 346 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 HPS4Q9NQG7 708 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 TDP1Q9NUW8 608 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 INTS13Q9NVM9 706 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 TFIP11Q9UBB9 837 aaKnown RBP21.97■■□□□ 1.11
TRIM47-207ENST00000593089 PTPRJQ12913 1337 aa21.97■■□□□ 1.11
TRIM47-207ENST00000593089 KIAA0391O15091 583 aaKnown RBP21.96■■□□□ 1.11
TRIM47-207ENST00000593089 SPTLC2O15270 562 aa21.96■■□□□ 1.11
TRIM47-207ENST00000593089 PAPSS2O95340 614 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms