RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 BCO2Q9BYV7 579 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 RHOBTB2Q9BYZ6 727 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 ELOVL4Q9GZR5 314 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 ADAM7Q9H2U9 754 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 VRTNQ9H8Y1 702 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 MAN1C1Q9NR34 630 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 PCDHB8Q9UN66 801 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 A0A1W2PQC6 194 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 GLUD1P00367 558 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 CFHP08603 1231 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 PDGFRBP09619 1106 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 UCHL3P15374 230 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 FGFR3P22607 806 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 ATICP31939 592 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 PNPLA4P41247 253 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 MYO1EQ12965 1108 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 PSMD5Q16401 504 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 UVSSAQ2YD98 709 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 WDR44Q5JSH3 913 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 VARS2Q5ST30 1063 aaKnown RBP10.3□□□□□ -0.76
DDX39A-220ENST00000593008 CES5AQ6NT32 575 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 LNX1Q8TBB1 728 aaPredicted RBP10.3□□□□□ -0.76
DDX39A-220ENST00000593008 ZSWIM1Q9BR11 485 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 EPHX3Q9H6B9 360 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 RXFP1Q9HBX9 757 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 CISHQ9NSE2 258 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 TMLHEQ9NVH6 421 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 DZANK1Q9NVP4 752 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 GDAP2Q9NXN4 497 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 PRKAG3Q9UGI9 489 aa10.3□□□□□ -0.76
DDX39A-220ENST00000593008 C19orf67A6NJJ6 358 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 LRRC53A6NM62 1247 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 F8VZ95 297 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 FOXN3O00409 490 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-220ENST00000593008 CBFA2T2O43439 604 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 TGM5O43548 720 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 HUS1O60921 280 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 CILPO75339 1184 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 RFPL2O75678 378 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 VNN2O95498 520 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 ODC1P11926 461 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 KRT5P13647 590 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 CASP14P31944 242 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 NDST1P52848 882 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 JAM2P57087 298 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 ITIH3Q06033 890 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 ELAVL2Q12926 359 aaKnown RBP10.29□□□□□ -0.76
DDX39A-220ENST00000593008 TBX2Q13207 712 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-220ENST00000593008 DRAP1Q14919 205 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-220ENST00000593008 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-220ENST00000593008 DPH6Q7L8W6 267 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 LRRTM3Q86VH5 581 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 TTC9BQ8N6N2 239 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 TOP6BLQ8N6T0 577 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 RBBP8NLQ8NC74 664 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-220ENST00000593008 STKLD1Q8NE28 680 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 APPL2Q8NEU8 664 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 NEK11Q8NG66 645 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 OLIG1Q8TAK6 271 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 PIK3R5Q8WYR1 880 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 TAF4BQ92750 862 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 MRFAP1L1Q96HT8 127 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 CLSTN3Q9BQT9 956 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 PHF7Q9BWX1 381 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-220ENST00000593008 IMPG2Q9BZV3 1241 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 POMKQ9H5K3 350 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 SFXN1Q9H9B4 322 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 PLCB1Q9NQ66 1216 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 CRTAC1Q9NQ79 661 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.29□□□□□ -0.76
DDX39A-220ENST00000593008 FAM49BQ9NUQ9 324 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 R3HCC1Q9Y3T6 440 aaKnown RBP10.29□□□□□ -0.76
DDX39A-220ENST00000593008 PCDHB4Q9Y5E5 795 aa10.29□□□□□ -0.76
DDX39A-220ENST00000593008 CCDC195A0A1B0GUA6 201 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 MYBPHLA2RUH7 354 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 FAM86C2PA6NEL3 165 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 CYP26A1O43174 497 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 TRAPPC3O43617 180 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 SOAT2O75908 522 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 GFPT2O94808 682 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 CYP11A1P05108 521 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 CCDC130P13994 396 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 TRIM21P19474 475 aaKnown RBP10.28□□□□□ -0.76
DDX39A-220ENST00000593008 WARSP23381 471 aaKnown RBP10.28□□□□□ -0.76
DDX39A-220ENST00000593008 BRD2P25440 801 aaKnown RBP10.28□□□□□ -0.76
DDX39A-220ENST00000593008 OR1D2P34982 312 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 USP8P40818 1118 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 ZNF132P52740 706 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 CACNA2D1P54289 1103 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 RAD23BP54727 409 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 ADKP55263 362 aaKnown RBP10.28□□□□□ -0.76
DDX39A-220ENST00000593008 ARPP19P56211 112 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 GCNT1Q02742 428 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 CREMQ03060 361 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 ARID5AQ03989 594 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 INCA1Q0VD86 236 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 CETN1Q12798 172 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 ATAT1Q5SQI0 421 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 SPECC1LQ69YQ0 1117 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 OVOS1Q6IE37 1185 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms