RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 L1RE1Q9UN81 338 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.76□□□□□ -0.21
PTBP1-216ENST00000590887 M0QZQ0 153 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 O00370 1275 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 CES2O00748 559 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 GABRDO14764 452 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 TADA2AO75478 443 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 BAIAP3O94812 1187 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 MICAL2O94851 1124 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 CYP11A1P05108 521 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 OR1G1P47890 313 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 BCAT1P54687 386 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 TSPY1Q01534 308 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 MEI1Q5TIA1 1274 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 CCDC181Q5TID7 509 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 SCARA3Q6AZY7 606 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 DNAJC24Q6P3W2 148 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 DCUN1D2Q6PH85 259 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 MON1BQ7L1V2 547 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 SLFN11Q7Z7L1 901 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 ACOT1Q86TX2 421 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 PALB2Q86YC2 1186 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 PASD1Q8IV76 773 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 ANKRD52Q8NB46 1076 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 C1orf131Q8NDD1 294 aaKnown RBP13.75□□□□□ -0.21
PTBP1-216ENST00000590887 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.75□□□□□ -0.21
PTBP1-216ENST00000590887 OLIG1Q8TAK6 271 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 LINC01599Q8WXQ3 324 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 TFAP2BQ92481 460 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 SUSD3Q96L08 255 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 NCAPGQ9BPX3 1015 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 ACBD6Q9BR61 282 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 C11orf70Q9BRQ4 267 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 WNT8AQ9H1J5 351 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 PRDM5Q9NQX1 630 aaPredicted RBP13.75□□□□□ -0.21
PTBP1-216ENST00000590887 TBC1D13Q9NVG8 400 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 DDX43Q9NXZ2 648 aaKnown RBP13.75□□□□□ -0.21
PTBP1-216ENST00000590887 IP6K2Q9UHH9 426 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 TSPAN16Q9UKR8 245 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 PCDHB8Q9UN66 801 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 FAN1Q9Y2M0 1017 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 CAPN6Q9Y6Q1 641 aa13.75□□□□□ -0.21
PTBP1-216ENST00000590887 GRID2IPA4D2P6 1211 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 SYN3O14994 580 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 SPTLC1O15269 473 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 PDGFRBP09619 1106 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 PTPN1P18031 435 aaKnown RBP13.74□□□□□ -0.21
PTBP1-216ENST00000590887 GSCP56915 257 aaPredicted RBP13.74□□□□□ -0.21
PTBP1-216ENST00000590887 DSC1Q08554 894 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 BST2Q10589 180 aaKnown RBP13.74□□□□□ -0.21
PTBP1-216ENST00000590887 LRRC26Q2I0M4 334 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 GOLGA7BQ2TAP0 167 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 CLLU1OSQ5K130 101 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 PLEKHA7Q6IQ23 1121 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 MFSD5Q6N075 450 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 MMS22LQ6ZRQ5 1243 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 COLGALT2Q8IYK4 626 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 LRRC43Q8N309 656 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 B3GALNT2Q8NCR0 500 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 FEZF2Q8TBJ5 459 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 KBTBD7Q8WVZ9 684 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 HSFY1Q96LI6 401 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 TWNKQ96RR1 684 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 NAP1L3Q99457 506 aaPredicted RBP13.74□□□□□ -0.21
PTBP1-216ENST00000590887 HNRNPABQ99729 332 aaKnown RBP13.74□□□□□ -0.21
PTBP1-216ENST00000590887 MED10Q9BTT4 135 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 RNF19AQ9NV58 838 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 SNX12Q9UMY4 172 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 MRFAP1Q9Y605 127 aa13.74□□□□□ -0.21
PTBP1-216ENST00000590887 TTC3P53804 2025 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 FGFR1P11362 822 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 RRM1P23921 792 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 CETN2P41208 172 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 GPD2P43304 727 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 GABRB2P47870 512 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 PPIGQ13427 754 aaKnown RBP eCLIP13.73□□□□□ -0.214e-8■□□□□ 9.9
PTBP1-216ENST00000590887 MESDQ14696 234 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 GPNMBQ14956 572 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 CFAP221Q4G0U5 840 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 TIGD5Q53EQ6 642 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 PPP1R26Q5T8A7 1209 aaPredicted RBP13.73□□□□□ -0.21
PTBP1-216ENST00000590887 WSCD1Q658N2 575 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 OVOS1Q6IE37 1185 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 CCDC70Q6NSX1 233 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 DENND1BQ6P3S1 775 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 DCP1BQ8IZD4 617 aaKnown RBP13.73□□□□□ -0.21
PTBP1-216ENST00000590887 C3orf20Q8ND61 904 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 MYRIPQ8NFW9 859 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 ARHGEF26Q96DR7 871 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 CASD1Q96PB1 797 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 OSGEPQ9NPF4 335 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 STK39Q9UEW8 545 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 SALL4Q9UJQ4 1053 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 ANAPC7Q9UJX3 599 aa13.73□□□□□ -0.21
PTBP1-216ENST00000590887 CCDC66A2RUB6 948 aa13.72□□□□□ -0.21
PTBP1-216ENST00000590887 CTAGE15A4D2H0 777 aa13.72□□□□□ -0.21
PTBP1-216ENST00000590887 TBKBP1A7MCY6 615 aa13.72□□□□□ -0.21
PTBP1-216ENST00000590887 H7C4K7 107 aa13.72□□□□□ -0.21
PTBP1-216ENST00000590887 ENC1O14682 589 aa13.72□□□□□ -0.21
PTBP1-216ENST00000590887 RIOK3O14730 519 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms