RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 RYBPQ8N488 228 aaPredicted RBP15.3■□□□□ 0.04
RETREG3-208ENST00000589797 MYH6P13533 1939 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 SPARCL1Q14515 664 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 CELF3Q5SZQ8 465 aaKnown RBP15.3■□□□□ 0.04
RETREG3-208ENST00000589797 DENND1BQ6P3S1 775 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 SRLQ86TD4 932 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 WDR49Q8IV35 697 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 SIX2Q9NPC8 291 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 DDX56Q9NY93 547 aaKnown RBP15.3■□□□□ 0.04
RETREG3-208ENST00000589797 LRFN2Q9ULH4 789 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 TPX2Q9ULW0 747 aaKnown RBP15.3■□□□□ 0.04
RETREG3-208ENST00000589797 ITGB4P16144 1822 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 GOLGA8CPA6NN73 597 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 COPEO14579 308 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 PCK1P35558 622 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 CTCFP49711 727 aaPredicted RBP15.29■□□□□ 0.04
RETREG3-208ENST00000589797 C15orf59Q2T9L4 293 aaPredicted RBP15.29■□□□□ 0.04
RETREG3-208ENST00000589797 ZNF677Q86XU0 584 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 CTNNAL1Q9UBT7 734 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 TSPAN16Q9UKR8 245 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 ATRNL1Q5VV63 1379 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 BAG2O95816 211 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 SULT1E1P49888 294 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 NOTUMQ6P988 496 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 ADGRA3Q8IWK6 1321 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 SLC7A14Q8TBB6 771 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 XPO6Q96QU8 1125 aaKnown RBP15.29■□□□□ 0.04
RETREG3-208ENST00000589797 BEGAINQ9BUH8 593 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 SOWAHBA6NEL2 793 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 FOXO6A8MYZ6 492 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 APOL1O14791 398 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 GPD1P21695 349 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 GTF2A2P52657 109 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 TMEM176AQ96HP8 235 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 IFT122Q9HBG6 1241 aa15.29■□□□□ 0.04
RETREG3-208ENST00000589797 CASTOR2A6NHX0 329 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 IL18RAPO95256 599 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 THPOP40225 353 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 NCKAP1LP55160 1127 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 DNAJC3Q13217 504 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 TTMPQ5BVD1 217 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 TMC3Q7Z5M5 1100 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 SAMD3Q8N6K7 520 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 TNIP3Q96KP6 325 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 AFG3L2Q9Y4W6 797 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 PCDHA3Q9Y5H8 950 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 CDH16O75309 829 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 ZNF844Q08AG5 666 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 FAM172AQ8WUF8 416 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 PGBD4Q96DM1 585 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 APOL2Q9BQE5 337 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 CDT1Q9H211 546 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 TAS2R40P59535 323 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 ATP11CQ8NB49 1132 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 HIPK4Q8NE63 616 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 PLEKHO2Q8TD55 490 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 PPP1R36Q96LQ0 422 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 SYT17Q9BSW7 474 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.28■□□□□ 0.044e-8■□□□□ 10.3
RETREG3-208ENST00000589797 STAP1Q9ULZ2 295 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 PPP4R1Q8TF05 950 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 RAPGEF5Q92565 580 aa15.28■□□□□ 0.04
RETREG3-208ENST00000589797 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.28■□□□□ 0.04
RETREG3-208ENST00000589797 DFFAO00273 331 aa15.27■□□□□ 0.04
RETREG3-208ENST00000589797 PLA2G6O60733 806 aa15.27■□□□□ 0.04
RETREG3-208ENST00000589797 ZC3H11AO75152 810 aaKnown RBP eCLIP15.27■□□□□ 0.04
RETREG3-208ENST00000589797 KRT37O76014 449 aa15.27■□□□□ 0.04
RETREG3-208ENST00000589797 POMCP01189 267 aa15.27■□□□□ 0.04
RETREG3-208ENST00000589797 NCAM1P13591 858 aa15.27■□□□□ 0.04
RETREG3-208ENST00000589797 MMP14P50281 582 aa15.27■□□□□ 0.04
RETREG3-208ENST00000589797 PTGISQ16647 500 aa15.27■□□□□ 0.04
RETREG3-208ENST00000589797 PDCD6IPQ8WUM4 868 aaKnown RBP15.27■□□□□ 0.04
RETREG3-208ENST00000589797 EXT2Q93063 718 aa15.27■□□□□ 0.04
RETREG3-208ENST00000589797 NUDT5Q9UKK9 219 aa15.27■□□□□ 0.04
RETREG3-208ENST00000589797 USP18Q9UMW8 372 aa15.27■□□□□ 0.04
RETREG3-208ENST00000589797 SSX2IPQ9Y2D8 614 aa15.27■□□□□ 0.04
RETREG3-208ENST00000589797 E5RJQ4 531 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 PGK1P00558 417 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 CAV1Q03135 178 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 OVGP1Q12889 678 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 ARL13BQ3SXY8 428 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 TFDP3Q5H9I0 405 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 EFHC2Q5JST6 749 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 ZPBP2Q6X784 338 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 SPOCD1Q6ZMY3 1216 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 LRRC34Q8IZ02 419 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 KIF2BQ8N4N8 673 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 CFAP61Q8NHU2 1237 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 HELQQ8TDG4 1101 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 TEPSINQ96N21 525 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 WDR35Q9P2L0 1181 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 ZC3H7BQ9UGR2 993 aaKnown RBP15.27■□□□□ 0.03
RETREG3-208ENST00000589797 MYH3P11055 1940 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 IQANK1A0A1B0GTG1 560 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 SSTR1P30872 391 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 MAMLD1Q13495 774 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 NFIL3Q16649 462 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 ZNF484Q5JVG2 852 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 C11orf63Q6NUN7 778 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 CXCL17Q6UXB2 119 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms