RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 RBBP8NLQ8NC74 664 aaPredicted RBP16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 ZNF461Q8TAF7 563 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 SHC3Q92529 594 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 TMEM176AQ96HP8 235 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 PGLYRP2Q96PD5 576 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 PKMYT1Q99640 499 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 LPIN3Q9BQK8 851 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 STK33Q9BYT3 514 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 NLRC4Q9NPP4 1024 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 TMLHEQ9NVH6 421 aa16.48■□□□□ 0.23
RPRD1A-208ENST00000589050 ABLIM3O94929 683 aa16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 SPATA31D3P0C874 917 aa16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 MAPRE1Q15691 268 aaKnown RBP16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 TPGS2Q68CL5 300 aa16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 LLGL2Q6P1M3 1020 aa16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 FAM171BQ6P995 826 aa16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 SPATA31D4Q6ZUB0 917 aa16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 CACNA2D4Q7Z3S7 1137 aa16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 SLC4A11Q8NBS3 891 aa16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 MYCBPAPQ8TBZ2 947 aa16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 SLC22A17Q8WUG5 538 aa16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 MYLPFQ96A32 169 aa16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 HEXIM2Q96MH2 286 aaKnown RBP16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 SPAG5Q96R06 1193 aa16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 CEP72Q9P209 647 aa16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 CNTN6Q9UQ52 1028 aa16.47■□□□□ 0.23
RPRD1A-208ENST00000589050 FSD2A1L4K1 749 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 MTMR11A4FU01 709 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 GOLGA6L3A6NEY3 463 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 F8VZ95 297 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 RNF225M0QZC1 329 aaPredicted RBP16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 FOXN3O00409 490 aaPredicted RBP16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 PNMA6AP0CW24 399 aaPredicted RBP16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 EPCAMP16422 314 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 ZNF75DP51815 510 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 CYP27A1Q02318 531 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 ADCY1Q08828 1119 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 SMARCB1Q12824 385 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 NFE2Q16621 373 aaPredicted RBP16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 LILRA6Q6PI73 481 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 SPATA2LQ8IUW3 424 aaPredicted RBP16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 NUP58Q9BVL2 599 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 GPR88Q9GZN0 384 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 FAM49BQ9NUQ9 324 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 ABI2Q9NYB9 513 aaPredicted RBP16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 AFF4Q9UHB7 1163 aaKnown RBP16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 PCDHB5Q9Y5E4 795 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 HCFC2Q9Y5Z7 792 aa16.46■□□□□ 0.23
RPRD1A-208ENST00000589050 ITIH6Q6UXX5 1313 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 VNN2O95498 520 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 C1RP00736 705 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 PAEPP09466 180 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 ATF2P15336 505 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 CD19P15391 556 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 ELF1P32519 619 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 ZNF132P52740 706 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 JAM2P57087 298 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 RBM10P98175 930 aaKnown RBP16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 SPECC1LQ69YQ0 1117 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 C4orf50Q6ZRC1 276 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 VSTM4Q8IW00 320 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 EFHBQ8N7U6 833 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 C12orf29Q8N999 325 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 ATAD1Q8NBU5 361 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 KREMEN2Q8NCW0 462 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 C2orf15Q8WU43 125 aaKnown RBP16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 PCED1BQ96HM7 432 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 MED10Q9BTT4 135 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 CYP4F11Q9HBI6 524 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 MAN1C1Q9NR34 630 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 FBXW11Q9UKB1 542 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 MAFFQ9ULX9 164 aa16.45■□□□□ 0.22
RPRD1A-208ENST00000589050 PRRG1O14668 218 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 LINC01565O15544 149 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 CYP26A1O43174 497 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 SEC24AO95486 1093 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 CALCAP01258 141 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 CCDC130P13994 396 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 CCDC85BQ15834 202 aaPredicted RBP16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 SGO2Q562F6 1265 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 FIGNQ5HY92 759 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 LIN9Q5TKA1 542 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 SMYD5Q6GMV2 418 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 ELMSAN1Q6PJG2 1045 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 TCEAL8Q8IYN2 117 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 FAM71AQ8IYT1 594 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 VN1R2Q8NFZ6 395 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 SPPL2BQ8TCT7 592 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 SLC2A14Q8TDB8 520 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 IQCDQ96DY2 449 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 MRFAP1L1Q96HT8 127 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 B3GNT5Q9BYG0 378 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 RHOBTB2Q9BYZ6 727 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 TTYH3Q9C0H2 523 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 DPP7Q9UHL4 492 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 KIAA1257Q9ULG3 409 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 SLC27A5Q9Y2P5 690 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.44■□□□□ 0.225e-8■□□□□ 10.9
RPRD1A-208ENST00000589050 ATP8B3O60423 1300 aa16.44■□□□□ 0.22
RPRD1A-208ENST00000589050 TRANK1O15050 2925 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms