RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 FAM193AP78312 1265 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 CCT2P78371 535 aaKnown RBP8.82□□□□□ -1
ATG4D-210ENST00000588972 CCNA1P78396 465 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 JAG1P78504 1218 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 SEMA5AQ13591 1074 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 SPIDRQ14159 915 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 TIGD5Q53EQ6 642 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 ZNF574Q6ZN55 896 aaPredicted RBP8.82□□□□□ -1
ATG4D-210ENST00000588972 ZNF589Q86UQ0 364 aaPredicted RBP8.82□□□□□ -1
ATG4D-210ENST00000588972 KIAA0319LQ8IZA0 1049 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 ENAHQ8N8S7 591 aaPredicted RBP8.82□□□□□ -1
ATG4D-210ENST00000588972 RSAD2Q8WXG1 361 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 DYNLL2Q96FJ2 89 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 PEX11GQ96HA9 241 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 B3GNT5Q9BYG0 378 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 TNFRSF12AQ9NP84 129 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 PRDM7Q9NQW5 492 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 UCKL1Q9NWZ5 548 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 NUDT5Q9UKK9 219 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 SLC5A6Q9Y289 635 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 IPPQ9Y573 584 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 PCDHGB6Q9Y5F9 930 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 CDY2AQ9Y6F7 541 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 ZNF236Q9UL36 1845 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 RLFQ13129 1914 aa8.82□□□□□ -1
ATG4D-210ENST00000588972 ZC3H12DA2A288 527 aaKnown RBP8.81□□□□□ -1
ATG4D-210ENST00000588972 CCDC154A6NI56 674 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 NFIBO00712 420 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 HTRA2O43464 458 aaPredicted RBP8.81□□□□□ -1
ATG4D-210ENST00000588972 PPFIA4O75335 1185 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 ALDH2P05091 517 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 FOSL2P15408 326 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 THBS2P35442 1172 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 BCAR1P56945 870 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 ERVFC1P60507 584 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 LONRF1Q17RB8 773 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 RSPO4Q2I0M5 234 aaPredicted RBP8.81□□□□□ -1
ATG4D-210ENST00000588972 KIAA0753Q2KHM9 967 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 INO80DQ53TQ3 878 aaPredicted RBP8.81□□□□□ -1
ATG4D-210ENST00000588972 VPS53Q5VIR6 699 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 ERICH6BQ5W0A0 696 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 XRRA1Q6P2D8 792 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 CTR9Q6PD62 1173 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 SLC44A5Q8NCS7 719 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 VPS37AQ8NEZ2 397 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 OR14C36Q8NHC7 312 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 LPAR1Q92633 364 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 ATP8A2Q9NTI2 1148 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 RABGAP1Q9Y3P9 1069 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 BDP1A6H8Y1 2624 aa8.81□□□□□ -1
ATG4D-210ENST00000588972 LAMA4Q16363 1823 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 FAM181BA6NEQ2 426 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 SLC15A5A6NIM6 579 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 PQBP1O60828 265 aaKnown RBP8.8□□□□□ -1
ATG4D-210ENST00000588972 TCEA3O75764 348 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 PCDH8O95206 1070 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 HPXP02790 462 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 CYBBP04839 570 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 HOXC6P09630 235 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 PNLIPP16233 465 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 SHMT1P34896 483 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 TDO2P48775 406 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 PPARAQ07869 468 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 GRB14Q14449 540 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 WDR78Q5VTH9 848 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 PAQR3Q6TCH7 311 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 CWC27Q6UX04 472 aaKnown RBP8.8□□□□□ -1
ATG4D-210ENST00000588972 FOXP4Q8IVH2 680 aaPredicted RBP8.8□□□□□ -1
ATG4D-210ENST00000588972 FAM186BQ8IYM0 893 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 NRG4Q8WWG1 115 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 CCDC120Q96HB5 630 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 C12orf42Q96LP6 360 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 LRFN3Q9BTN0 628 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 IL25Q9H293 177 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 BHMT2Q9H2M3 363 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 SEMA6BQ9H3T3 888 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 PRDM16Q9HAZ2 1276 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 HELLSQ9NRZ9 838 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 FLRT1Q9NZU1 646 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 L1RE1Q9UN81 338 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 DMTF1Q9Y222 760 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 ATP11BQ9Y2G3 1177 aa8.8□□□□□ -1
ATG4D-210ENST00000588972 XIRP2A4UGR9 3374 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 KBTBD13C9JR72 458 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 CNMDO75829 334 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 GNAT2P19087 354 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 PTGS1P23219 599 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 ARL4AP40617 200 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 WASP42768 502 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 TRAPPC10P48553 1259 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 GALK1P51570 392 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 GABPAQ06546 454 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 MALLQ13021 153 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 NOLC1Q14978 699 aaKnown RBP eCLIP8.79□□□□□ -1
ATG4D-210ENST00000588972 SNX17Q15036 470 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 SHHQ15465 462 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 ADRM1Q16186 407 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 C3orf36Q3SXR2 165 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 MCMDC2Q4G0Z9 681 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 C9orf50Q5SZB4 431 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms