RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 FAM47DPA6NHR8 397 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 DCDC2CA8MYV0 355 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 ANKRD65E5RJM6 399 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 INO80B-WBP1J3KQ70 363 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 SGK1O00141 431 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 MCF2LO15068 1137 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 ALOX15BO15296 676 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 PRPF4O43172 522 aaKnown RBP eCLIP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 STAU1O95793 577 aaKnown RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 HMGCRP04035 888 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 SRGAP2CP0DJJ0 459 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 SETSIPP0DME0 302 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 VDRP11473 427 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 PROZP22891 400 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 BRD2P25440 801 aaKnown RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 ALDH3A1P30838 453 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 HNRNPH1P31943 449 aaKnown RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 PCK1P35558 622 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 CHKAP35790 457 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 SKIV2L2P42285 1042 aaKnown RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 SCTRP47872 440 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 ARSEP51690 589 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 MNAT1P51948 309 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 GTF2A1P52655 376 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 PSMC1P62191 440 aaKnown RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 CCNA1P78396 465 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 CDC42EP1Q00587 391 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 PLCB3Q01970 1234 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 GPS1Q13098 491 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 XRCC4Q13426 336 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 ACVR2BQ13705 512 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 LAMC2Q13753 1193 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 VGLL4Q14135 290 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 SPARCL1Q14515 664 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 SETDB1Q15047 1291 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 SNCBQ16143 134 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 KYNUQ16719 465 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 QPCTQ16769 361 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 LONRF1Q17RB8 773 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 ZC3H12AQ5D1E8 599 aaKnown RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 PPP1R15BQ5SWA1 713 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 SWT1Q5T5J6 900 aaKnown RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 KAZNQ674X7 775 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 BBS12Q6ZW61 710 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 TRPM8Q7Z2W7 1104 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 VSIG1Q86XK7 387 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 IFNLR1Q8IU57 520 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 ANKRD13AQ8IZ07 590 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 CCDC63Q8NA47 563 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 ATP11CQ8NB49 1132 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 UHMK1Q8TAS1 419 aaKnown RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 FBF1Q8TES7 1133 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 AFG1LQ8WV93 481 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 APBB2Q92870 758 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 HAUS1Q96CS2 278 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 SPATA33Q96N06 139 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 ELAC2Q9BQ52 826 aaKnown RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 ADPGKQ9BRR6 497 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 DDX23Q9BUQ8 820 aaKnown RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 BCO2Q9BYV7 579 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 INO80BQ9C086 356 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 HAPLN2Q9GZV7 340 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 ADAM7Q9H2U9 754 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 FZD8Q9H461 694 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 RSAD1Q9HA92 442 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 PRDM16Q9HAZ2 1276 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 ADARB2Q9NS39 739 aaKnown RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 KLC4Q9NSK0 619 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 ERAP1Q9NZ08 941 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 PSMC3IPQ9P2W1 217 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 ITGA11Q9UKX5 1188 aa7.54□□□□□ -1.2
SPIDR-228ENST00000588781 SCAF8Q9UPN6 1271 aaKnown RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 R3HDM2Q9Y2K5 976 aaKnown RBP7.54□□□□□ -1.2
SPIDR-228ENST00000588781 PTPRJQ12913 1337 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 THSD7BQ9C0I4 1608 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-228ENST00000588781 TCRBV5S1A1TA0A578 114 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 TCP11X1B4DZS4 312 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 RASA4BC9J798 803 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 RASA4O43374 803 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 FAM189A1O60320 539 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 SNX3O60493 162 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 HNRNPCL1O60812 293 aaKnown RBP7.53□□□□□ -1.2
SPIDR-228ENST00000588781 ZWINTO95229 277 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 ERBB2P04626 1255 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 HOXC6P09630 235 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 STIP1P31948 543 aaKnown RBP7.53□□□□□ -1.2
SPIDR-228ENST00000588781 CDKN2BP42772 138 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 IFNAR2P48551 515 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 VPS41P49754 854 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 RBP5P82980 135 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 RNASELQ05823 741 aaKnown RBP7.53□□□□□ -1.2
SPIDR-228ENST00000588781 PTPN11Q06124 597 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-228ENST00000588781 CCDC15Q0P6D6 951 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 MYO1EQ12965 1108 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 PPIL2Q13356 520 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 TMED2Q15363 201 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 PCBP1Q15365 356 aaKnown RBP eCLIP7.53□□□□□ -1.2
SPIDR-228ENST00000588781 TRIP13Q15645 432 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-228ENST00000588781 OASLQ15646 514 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms