RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 SV2CQ496J9 727 aa15□□□□□ -0.01
LIG3-205ENST00000585941 FAM47CQ5HY64 1035 aa15□□□□□ -0.01
LIG3-205ENST00000585941 AADACL2Q6P093 401 aa15□□□□□ -0.01
LIG3-205ENST00000585941 ADAT2Q7Z6V5 191 aaKnown RBP15□□□□□ -0.01
LIG3-205ENST00000585941 RCOR2Q8IZ40 523 aa15□□□□□ -0.01
LIG3-205ENST00000585941 C18orf25Q96B23 403 aaPredicted RBP15□□□□□ -0.01
LIG3-205ENST00000585941 ERP44Q9BS26 406 aa15□□□□□ -0.01
LIG3-205ENST00000585941 FAM129AQ9BZQ8 928 aa15□□□□□ -0.01
LIG3-205ENST00000585941 SENP6Q9GZR1 1112 aaPredicted RBP15□□□□□ -0.01
LIG3-205ENST00000585941 LRRC19Q9H756 370 aa15□□□□□ -0.01
LIG3-205ENST00000585941 ERVK-5Q9HDB9 667 aa15□□□□□ -0.01
LIG3-205ENST00000585941 SLC38A7Q9NVC3 462 aa15□□□□□ -0.01
LIG3-205ENST00000585941 DDX56Q9NY93 547 aaKnown RBP15□□□□□ -0.01
LIG3-205ENST00000585941 FEZ2Q9UHY8 353 aaPredicted RBP15□□□□□ -0.01
LIG3-205ENST00000585941 ESYT3A0FGR9 886 aa14.99□□□□□ -0.01
LIG3-205ENST00000585941 ASGR1P07306 291 aa14.99□□□□□ -0.01
LIG3-205ENST00000585941 OAS2P29728 719 aaKnown RBP14.99□□□□□ -0.01
LIG3-205ENST00000585941 TAF6P49848 677 aa14.99□□□□□ -0.01
LIG3-205ENST00000585941 PDCLQ13371 301 aa14.99□□□□□ -0.01
LIG3-205ENST00000585941 CCDC137Q6PK04 289 aaKnown RBP14.99□□□□□ -0.01
LIG3-205ENST00000585941 SYDE1Q6ZW31 735 aaPredicted RBP14.99□□□□□ -0.01
LIG3-205ENST00000585941 DPH6Q7L8W6 267 aa14.99□□□□□ -0.01
LIG3-205ENST00000585941 POLNQ7Z5Q5 900 aa14.99□□□□□ -0.01
LIG3-205ENST00000585941 XYLT1Q86Y38 959 aa14.99□□□□□ -0.01
LIG3-205ENST00000585941 SMG8Q8ND04 991 aaKnown RBP14.99□□□□□ -0.01
LIG3-205ENST00000585941 FAM71BQ8TC56 605 aa14.99□□□□□ -0.01
LIG3-205ENST00000585941 SLCO2A1Q92959 643 aa14.99□□□□□ -0.01
LIG3-205ENST00000585941 LRRC45Q96CN5 670 aa14.99□□□□□ -0.01
LIG3-205ENST00000585941 SRRDQ9UH36 339 aa14.99□□□□□ -0.01
LIG3-205ENST00000585941 ST3GAL5Q9UNP4 418 aa14.99□□□□□ -0.01
LIG3-205ENST00000585941 GOLGA6BA6NDN3 693 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 KPNA7A9QM74 516 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 HSF2BPO75031 334 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 RARAP10276 462 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 LRPAP1P30533 357 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 COILP38432 576 aaPredicted RBP14.98□□□□□ -0.01
LIG3-205ENST00000585941 SSR1P43307 286 aaKnown RBP14.98□□□□□ -0.01
LIG3-205ENST00000585941 SIX1Q15475 284 aaPredicted RBP14.98□□□□□ -0.01
LIG3-205ENST00000585941 KCNA10Q16322 511 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 GLRA4Q5JXX5 417 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 CYP4A22Q5TCH4 519 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 DUPD1Q68J44 220 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 RNF180Q86T96 592 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 JAMLQ86YT9 394 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 CCDC50Q8IVM0 306 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 GRK7Q8WTQ7 553 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 STK32AQ8WU08 396 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 MCRS1Q96EZ8 462 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 PKNOX2Q96KN3 472 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 CPXM1Q96SM3 734 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 HESX1Q9UBX0 185 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 CYTH4Q9UIA0 394 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 TSPAN16Q9UKR8 245 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 USTQ9Y2C2 406 aa14.98□□□□□ -0.01
LIG3-205ENST00000585941 AOC2O75106 756 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 CCND3P30281 292 aaPredicted RBP14.97□□□□□ -0.01
LIG3-205ENST00000585941 PTGIRP43119 386 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 TAS2R40P59535 323 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 MGAT3Q09327 533 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 TRIM32Q13049 653 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 ORC1Q13415 861 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 HADHQ16836 314 aaKnown RBP14.97□□□□□ -0.01
LIG3-205ENST00000585941 ODF2Q5BJF6 829 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 ARHGAP17Q68EM7 881 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 CCSAPQ6IQ19 270 aaPredicted RBP14.97□□□□□ -0.01
LIG3-205ENST00000585941 CCDC105Q8IYK2 499 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 TMEM130Q8N3G9 435 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 GOLGA6L1Q8N7Z2 621 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 MRPL45Q9BRJ2 306 aaKnown RBP14.97□□□□□ -0.01
LIG3-205ENST00000585941 OSBPL8Q9BZF1 889 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 CXCL16Q9H2A7 254 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 FAM105AQ9NUU6 356 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 RNF186Q9NXI6 227 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 KLK14Q9P0G3 267 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 GOLGA8SH3BPF8 625 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 PPEF2O14830 753 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 DAPK3O43293 454 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 OPA1O60313 960 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 CHRNA1P02708 482 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 KRT7P08729 469 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 PSMA2P25787 234 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 PTPN7P35236 360 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 RFC1P35251 1148 aaPredicted RBP14.97□□□□□ -0.01
LIG3-205ENST00000585941 HSPA9P38646 679 aaKnown RBP14.97□□□□□ -0.01
LIG3-205ENST00000585941 RAB27AP51159 221 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 ZNF252P-AS1Q0IIN9 211 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 PTK7Q13308 1070 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 MTMR3Q13615 1198 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 PTGISQ16647 500 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 SOWAHAQ2M3V2 549 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 GOLGA7BQ2TAP0 167 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 MAP3K21Q5TCX8 1036 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 LIMS2Q7Z4I7 341 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 CRYBG2Q8N1P7 616 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 TOP6BLQ8N6T0 577 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 APPL2Q8NEU8 664 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 OR6B3Q8NGW1 331 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 PXYLP1Q8TE99 480 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 GDAP1L1Q96MZ0 367 aa14.97□□□□□ -0.01
LIG3-205ENST00000585941 RUFY1Q96T51 708 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms