RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 BARX2Q9UMQ3 279 aaPredicted RBP11.04□□□□□ -0.64
LIG3-203ENST00000585370 NOC2LQ9Y3T9 749 aaKnown RBP11.04□□□□□ -0.64
LIG3-203ENST00000585370 SCINQ9Y6U3 715 aa11.04□□□□□ -0.64
LIG3-203ENST00000585370 MYH10P35580 1976 aa11.04□□□□□ -0.64
LIG3-203ENST00000585370 PTPRSQ13332 1948 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 SMIM28A0A1B0GU29 152 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 TARSL2A2RTX5 802 aaKnown RBP11.03□□□□□ -0.64
LIG3-203ENST00000585370 TLL1O43897 1013 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 ZNF623O75123 536 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 CILPO75339 1184 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 PARNO95453 639 aaKnown RBP11.03□□□□□ -0.64
LIG3-203ENST00000585370 WEE2P0C1S8 567 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 CD58P19256 250 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 NOMO3P69849 1222 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 DEFB103AP81534 67 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 MGAT3Q09327 533 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 INCA1Q0VD86 236 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 MBTPS1Q14703 1052 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 BRD3Q15059 726 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 PPP2R5EQ16537 467 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 ZNF618Q5T7W0 954 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 NAA35Q5VZE5 725 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 CNKSR3Q6P9H4 555 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 UNC93AQ86WB7 457 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 ZNF564Q8TBZ8 553 aaPredicted RBP11.03□□□□□ -0.64
LIG3-203ENST00000585370 ACTRT1Q8TDG2 376 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 COG1Q8WTW3 980 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 TMEM176AQ96HP8 235 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 CAPZA3Q96KX2 299 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 NECAB3Q96P71 396 aaPredicted RBP11.03□□□□□ -0.64
LIG3-203ENST00000585370 NUP85Q9BW27 656 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 PLVAPQ9BX97 442 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 OSGEPQ9NPF4 335 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 UBN1Q9NPG3 1134 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 ACP6Q9NPH0 428 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 ADAM22Q9P0K1 906 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 PARP2Q9UGN5 583 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 STRIP2Q9ULQ0 834 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 ST3GAL5Q9UNP4 418 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 IPPQ9Y573 584 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 ALG6Q9Y672 507 aa11.03□□□□□ -0.64
LIG3-203ENST00000585370 ABHD14A-ACY1A0A1B0GW23 586 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 MYO1FO00160 1098 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 PIRO00625 290 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 KCNK3O14649 394 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 NCK2O43639 380 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 CHRNA1P02708 482 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 MMP8P22894 467 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 CTNNA2P26232 953 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 THPOP40225 353 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 KCNQ1P51787 676 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 RAD23BP54727 409 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 SNX16P57768 344 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 SKIV2LQ15477 1246 aaKnown RBP11.02□□□□□ -0.65
LIG3-203ENST00000585370 CNGA2Q16280 664 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 PLEKHA7Q6IQ23 1121 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 MON1BQ7L1V2 547 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 DPH6Q7L8W6 267 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 MRPL10Q7Z7H8 261 aaKnown RBP11.02□□□□□ -0.65
LIG3-203ENST00000585370 RASGEF1CQ8N431 466 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 SMG8Q8ND04 991 aaKnown RBP11.02□□□□□ -0.65
LIG3-203ENST00000585370 LRRN4CLQ8ND94 238 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 SPATA4Q8NEY3 305 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 CPA5Q8WXQ8 436 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 ELMO3Q96BJ8 720 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 NT5C1AQ9BXI3 368 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 CARD9Q9H257 536 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 NXF3Q9H4D5 531 aaKnown RBP11.02□□□□□ -0.65
LIG3-203ENST00000585370 ERVK-5Q9HDB9 667 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 PARVAQ9NVD7 372 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 GDAP2Q9NXN4 497 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 WDR35Q9P2L0 1181 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.02□□□□□ -0.65
LIG3-203ENST00000585370 POLIQ9UNA4 740 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 COG5Q9UP83 839 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 GIT1Q9Y2X7 761 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 V9GYY5 206 aaPredicted RBP11.02□□□□□ -0.65
LIG3-203ENST00000585370 ANK1P16157 1881 aa11.02□□□□□ -0.65
LIG3-203ENST00000585370 CCDC66A2RUB6 948 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 CCDC188H7C350 402 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 PDE2AO00408 941 aaPredicted RBP11.01□□□□□ -0.65
LIG3-203ENST00000585370 ZNF185O15231 689 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 ATP8B1O43520 1251 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 ERLIN1O75477 346 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 GJB5O95377 273 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 ITGA4P13612 1032 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 CD19P15391 556 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 H2AFXP16104 143 aaPredicted RBP11.01□□□□□ -0.65
LIG3-203ENST00000585370 LRPAP1P30533 357 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 NFX1Q12986 1120 aaKnown RBP11.01□□□□□ -0.65
LIG3-203ENST00000585370 IKBKEQ14164 716 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 MESDQ14696 234 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 NAA30Q147X3 362 aaPredicted RBP11.01□□□□□ -0.65
LIG3-203ENST00000585370 SV2CQ496J9 727 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 SGO2Q562F6 1265 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 FBXO47Q5MNV8 452 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 C9orf57Q5W0N0 161 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 SCARA5Q6ZMJ2 495 aa11.01□□□□□ -0.65
LIG3-203ENST00000585370 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.01□□□□□ -0.65
LIG3-203ENST00000585370 ERICH1Q86X53 443 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms