RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 KIF20AO95235 890 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 ATF6P18850 670 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 STARD6P59095 220 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 SMARCB1Q12824 385 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 PNOCQ13519 176 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 NFIL3Q16649 462 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 ZCWPW2Q504Y3 356 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 SPPL2BQ8TCT7 592 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 PARD3BQ8TEW8 1205 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 KBTBD7Q8WVZ9 684 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 CCDC34Q96HJ3 373 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 CNTNAP3BQ96NU0 1288 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 ACBD6Q9BR61 282 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 CNTNAP3Q9BZ76 1288 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 TMLHEQ9NVH6 421 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 SPATA6Q9NWH7 488 aaPredicted RBP14.28□□□□□ -0.12
SREBF1-223ENST00000584760 DDX43Q9NXZ2 648 aaKnown RBP14.28□□□□□ -0.12
SREBF1-223ENST00000584760 NCDNQ9UBB6 729 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 MAPK8IP1Q9UQF2 711 aa14.28□□□□□ -0.12
SREBF1-223ENST00000584760 MIA3Q5JRA6 1907 aa14.27□□□□□ -0.12
SREBF1-223ENST00000584760 COL4A3Q01955 1670 aa14.27□□□□□ -0.12
SREBF1-223ENST00000584760 LRRIQ3A6PVS8 624 aaPredicted RBP14.27□□□□□ -0.13
SREBF1-223ENST00000584760 ZNF197O14709 1029 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 LAMTOR5O43504 91 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 HCRTO43612 131 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 CALUO43852 315 aaPredicted RBP14.27□□□□□ -0.13
SREBF1-223ENST00000584760 KRT37O76014 449 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 STAU1O95793 577 aaKnown RBP14.27□□□□□ -0.13
SREBF1-223ENST00000584760 CST3P01034 146 aaPredicted RBP14.27□□□□□ -0.13
SREBF1-223ENST00000584760 FCARP24071 287 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 ACAT1P24752 427 aaKnown RBP14.27□□□□□ -0.13
SREBF1-223ENST00000584760 ALDH1A3P47895 512 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 CDR1P51861 262 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 EPHB3P54753 998 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 MYL7Q01449 175 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 TSPY1Q01534 308 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 CCDC142Q17RM4 750 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 MGAT5BQ3V5L5 792 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 INTS6LQ5JSJ4 861 aaKnown RBP14.27□□□□□ -0.13
SREBF1-223ENST00000584760 CYP4A22Q5TCH4 519 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 TDRD10Q5VZ19 366 aaKnown RBP14.27□□□□□ -0.13
SREBF1-223ENST00000584760 DPH6Q7L8W6 267 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 DCP1BQ8IZD4 617 aaKnown RBP14.27□□□□□ -0.13
SREBF1-223ENST00000584760 SHKBP1Q8TBC3 707 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 PSMG2Q969U7 264 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 MCRS1Q96EZ8 462 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 SEPT5Q99719 369 aaPredicted RBP14.27□□□□□ -0.13
SREBF1-223ENST00000584760 KXD1Q9BQD3 176 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 BCO2Q9BYV7 579 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 XYLT2Q9H1B5 865 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 ZNF334Q9HCZ1 680 aaPredicted RBP14.27□□□□□ -0.13
SREBF1-223ENST00000584760 ABI2Q9NYB9 513 aaPredicted RBP14.27□□□□□ -0.13
SREBF1-223ENST00000584760 R3HCC1Q9Y3T6 440 aaKnown RBP14.27□□□□□ -0.13
SREBF1-223ENST00000584760 MTF2Q9Y483 593 aaPredicted RBP14.27□□□□□ -0.13
SREBF1-223ENST00000584760 ZNF638Q14966 1978 aaKnown RBP14.27□□□□□ -0.13
SREBF1-223ENST00000584760 TICRRQ7Z2Z1 1910 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 ANAPC1Q9H1A4 1944 aa14.27□□□□□ -0.13
SREBF1-223ENST00000584760 KANSL1LA0AUZ9 987 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 MAPK13O15264 365 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 HAPLN1P10915 354 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-223ENST00000584760 MYL4P12829 197 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 GJA1P17302 382 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 NR2F2P24468 414 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 PCSK1P29120 753 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 LHX1P48742 406 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 TUFMP49411 452 aaKnown RBP14.26□□□□□ -0.13
SREBF1-223ENST00000584760 DLG4P78352 724 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 CSTF1Q05048 431 aaKnown RBP14.26□□□□□ -0.13
SREBF1-223ENST00000584760 UBXN2BQ14CS0 331 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 NFE2Q16621 373 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-223ENST00000584760 SLC44A4Q53GD3 710 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 CEP135Q66GS9 1140 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 DNAJB7Q7Z6W7 309 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-223ENST00000584760 SMYD4Q8IYR2 804 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-223ENST00000584760 SPATA20Q8TB22 786 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 TIGD1Q96MW7 591 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 LPIN3Q9BQK8 851 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 VRTNQ9H8Y1 702 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 ASB3Q9Y575 518 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 NME7Q9Y5B8 376 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 PCDHB5Q9Y5E4 795 aa14.26□□□□□ -0.13
SREBF1-223ENST00000584760 FAM170BA6NMN3 283 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 ECI2O75521 394 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 AKAP3O75969 853 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 C4BPAP04003 597 aaKnown RBP14.25□□□□□ -0.13
SREBF1-223ENST00000584760 CD72P21854 359 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 WARSP23381 471 aaKnown RBP14.25□□□□□ -0.13
SREBF1-223ENST00000584760 AP3M2P53677 418 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 MYL6P60660 151 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 TEAD2Q15562 447 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 FAM78AQ5JUQ0 283 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 C1orf220Q5T0J3 134 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 GAREM2Q75VX8 874 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 ITIH5Q86UX2 942 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 TMC2Q8TDI7 906 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 ATRIPQ8WXE1 791 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 ZSWIM3Q96MP5 696 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 ASB16Q96NS5 453 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 GSDMAQ96QA5 445 aa14.25□□□□□ -0.13
SREBF1-223ENST00000584760 ABCB6Q9NP58 842 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms