RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 GRAMD1CQ8IYS0 662 aa14.15□□□□□ -0.14
CDK5RAP3-234ENST00000584525 FAM160A2Q8N612 972 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP3-234ENST00000584525 PAGE5Q96GU1 130 aa14.15□□□□□ -0.14
CDK5RAP3-234ENST00000584525 C2orf42Q9NWW7 574 aa14.15□□□□□ -0.14
CDK5RAP3-234ENST00000584525 AGO2Q9UKV8 859 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-234ENST00000584525 HPSEQ9Y251 543 aa14.15□□□□□ -0.14
CDK5RAP3-234ENST00000584525 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP3-234ENST00000584525 UBE4BO95155 1302 aa14.15□□□□□ -0.15
CDK5RAP3-234ENST00000584525 CACNA1BQ00975 2339 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 PATJQ8NI35 1801 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 TTC26A0AVF1 554 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 MTMR11A4FU01 709 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 LACTBL1A8MY62 500 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 AXIN1O15169 862 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 EIF3DO15371 548 aaKnown RBP eCLIP14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 ACTN4O43707 911 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 FOXD2O60548 495 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 ZNF202O95125 648 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 CASP1P29466 404 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 TNFSF9P41273 254 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 AARSP49588 968 aaKnown RBP eCLIP14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 TNK2Q07912 1038 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 ZBTB6Q15916 424 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 WDR44Q5JSH3 913 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 IL31Q6EBC2 164 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 CNNM4Q6P4Q7 775 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 KRBA2Q6ZNG9 492 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 GAREM2Q75VX8 874 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 HS2ST1Q7LGA3 356 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 ITIH5Q86UX2 942 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 TTC9BQ8N6N2 239 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 KCNN1Q92952 543 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 PSMG2Q969U7 264 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 TMEM209Q96SK2 561 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 HAPLN2Q9GZV7 340 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 R3HCC1Q9Y3T6 440 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 F5P12259 2224 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 CITO14578 2027 aa14.14□□□□□ -0.15
CDK5RAP3-234ENST00000584525 ZFHX4Q86UP3 3567 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 ODC1P11926 461 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 TYMPP19971 482 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 HOXC13P31276 330 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 CDR1P51861 262 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 PLCB2Q00722 1185 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 PSMD2Q13200 908 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 TAF12Q16514 161 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 AASDHQ4L235 1098 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 WDR5BQ86VZ2 330 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 CD302Q8IX05 232 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 NELFCDQ8IXH7 590 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 SYNPOQ8N3V7 929 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 BPIFB1Q8TDL5 484 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 DDX1Q92499 740 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 HPS3Q969F9 1004 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 GCNAQ96QF7 691 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 FIZ1Q96SL8 496 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 SEPT5Q99719 369 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 LPIN3Q9BQK8 851 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 MKNK1Q9BUB5 465 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 TASP1Q9H6P5 420 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 SLC39A2Q9NP94 309 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 THG1LQ9NWX6 298 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 OBP2AQ9NY56 170 aa14.13□□□□□ -0.15
CDK5RAP3-234ENST00000584525 FAM237AA0A1B0GTK4 181 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 ANKRD63C9JTQ0 380 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 PPEF2O14830 753 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 KIAA0391O15091 583 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 EXTL3O43909 919 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 SMC2O95347 1197 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 PRAMEF12O95522 483 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 RPN1P04843 607 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 GARTP22102 1010 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 HOXA6P31267 233 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 PXNP49023 591 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 TUFMP49411 452 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 LILRA4P59901 499 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 CYP4F8P98187 520 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 FAM160A1Q05DH4 1040 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 CCINQ13939 588 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 VEPH1Q14D04 833 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 CCDC6Q16204 474 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 ENOX2Q16206 610 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 MGAT5BQ3V5L5 792 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 C12orf50Q8NA57 414 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 SENP8Q96LD8 212 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 SMG9Q9H0W8 520 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 ARRDC1-AS1Q9H2J1 176 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 GOLPH3LQ9H4A5 285 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 RMND1Q9NWS8 449 aa14.12□□□□□ -0.15
CDK5RAP3-234ENST00000584525 KMT2BQ9UMN6 2715 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-234ENST00000584525 A0A0B4J269 797 aa14.11□□□□□ -0.15
CDK5RAP3-234ENST00000584525 GOLGA6L22H0YM25 854 aa14.11□□□□□ -0.15
CDK5RAP3-234ENST00000584525 PPP1R37O75864 691 aa14.11□□□□□ -0.15
CDK5RAP3-234ENST00000584525 IL18RAPO95256 599 aa14.11□□□□□ -0.15
CDK5RAP3-234ENST00000584525 CDC25CP30307 473 aa14.11□□□□□ -0.15
CDK5RAP3-234ENST00000584525 ACOT2P49753 483 aa14.11□□□□□ -0.15
CDK5RAP3-234ENST00000584525 CASP5P51878 434 aa14.11□□□□□ -0.15
CDK5RAP3-234ENST00000584525 GRSF1Q12849 480 aaKnown RBP eCLIP14.11□□□□□ -0.15
CDK5RAP3-234ENST00000584525 SF3A2Q15428 464 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-234ENST00000584525 ITPRIPL2Q3MIP1 535 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms