RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	KRT79	Q5XKE5	535 aa		9.47	□□□□□ -0.89
NUP85-223	ENST00000583877	PSAPL1	Q6NUJ1	521 aa		9.47	□□□□□ -0.89
NUP85-223	ENST00000583877	CHFR	Q96EP1	664 aa		9.47	□□□□□ -0.89
NUP85-223	ENST00000583877	C8orf76	Q96K31	380 aa		9.47	□□□□□ -0.89
NUP85-223	ENST00000583877	SLC46A2	Q9BY10	475 aa		9.47	□□□□□ -0.89
NUP85-223	ENST00000583877	HAPLN2	Q9GZV7	340 aa		9.47	□□□□□ -0.89
NUP85-223	ENST00000583877	DUSP15	Q9H1R2	295 aa	Predicted RBP	9.47	□□□□□ -0.89
NUP85-223	ENST00000583877	SMOC1	Q9H4F8	434 aa		9.47	□□□□□ -0.89
NUP85-223	ENST00000583877	IL21	Q9HBE4	155 aa		9.47	□□□□□ -0.89
NUP85-223	ENST00000583877	HPS4	Q9NQG7	708 aa		9.47	□□□□□ -0.89
NUP85-223	ENST00000583877	GCN1	Q92616	2671 aa	Known RBP	9.47	□□□□□ -0.89
NUP85-223	ENST00000583877	LACTBL1	A8MY62	500 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	RNF40	O75150	1001 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	RHOBTB1	O94844	696 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	CYP11A1	P05108	521 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	ADRB2	P07550	413 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	ATF6	P18850	670 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	DRD1	P21728	446 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	DDX6	P26196	483 aa	Known RBP eCLIP	9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	MATR3	P43243	847 aa	Known RBP eCLIP	9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	ST3GAL1	Q11201	340 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	GNL2	Q13823	731 aa	Known RBP	9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	KARS	Q15046	597 aa	Known RBP	9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	ELF2	Q15723	593 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	SLC39A12	Q504Y0	691 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	UNQ6494/PRO21346	Q6UXR6	183 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	CMTM8	Q8IZV2	173 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	KDF1	Q8NAX2	398 aa	Predicted RBP	9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	FBXO18	Q8NFZ0	1043 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	C2orf15	Q8WU43	125 aa	Known RBP	9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	EXOC4	Q96A65	974 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	SENP8	Q96LD8	212 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	SEPT5	Q99719	369 aa	Predicted RBP	9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	LPIN3	Q9BQK8	851 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	EDEM2	Q9BV94	578 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	SMG9	Q9H0W8	520 aa	Known RBP	9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	EBF3	Q9H4W6	596 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	SH2B1	Q9NRF2	756 aa	Predicted RBP	9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	EBF1	Q9UH73	591 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	NOL7	Q9UMY1	257 aa	Known RBP	9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	ADAMTS20	P59510	1910 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	IGSF10	Q6WRI0	2623 aa		9.46	□□□□□ -0.9
NUP85-223	ENST00000583877	BCLAF3	A2AJT9	711 aa	Known RBP	9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	OTOL1	A6NHN0	477 aa	Predicted RBP	9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	SOBP	A7XYQ1	873 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	C1QTNF9B	B2RNN3	333 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877		H0YCG3	227 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	LAD1	O00515	517 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	PPEF2	O14830	753 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	FAM189A1	O60320	539 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	CAVIN2	O95810	425 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	EGF	P01133	1207 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	C1QTNF9	P0C862	333 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	AVPR1A	P37288	418 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	TNFSF9	P41273	254 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	NOVA1	P51513	510 aa	Known RBP	9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	GUCY2F	P51841	1108 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	CREB5	Q02930	508 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	RAD51AP2	Q09MP3	1159 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	SMARCB1	Q12824	385 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	ENOX2	Q16206	610 aa	Known RBP	9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	TAF12	Q16514	161 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	MGAT5B	Q3V5L5	792 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	FBXO43	Q4G163	708 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	SPATA1	Q5VX52	437 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	TRIM68	Q6AZZ1	485 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	TCEAL6	Q6IPX3	200 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	SYT13	Q7L8C5	426 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	KCNK18	Q7Z418	384 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	CD302	Q8IX05	232 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	KCTD17	Q8N5Z5	321 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	OR10T2	Q8NGX3	314 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	KCNN1	Q92952	543 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	USP13	Q92995	863 aa	Predicted RBP	9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	TCEAL3	Q969E4	200 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	BICD1	Q96G01	975 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	HHIP	Q96QV1	700 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	LLPH	Q9BRT6	129 aa	Known RBP	9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	MMTAG2	Q9BU76	263 aa	Known RBP	9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	ZCWPW1	Q9H0M4	648 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	RPF1	Q9H9Y2	349 aa	Known RBP	9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	KIF9	Q9HAQ2	790 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	TDP1	Q9NUW8	608 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	KCND2	Q9NZV8	630 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	DSE	Q9UL01	958 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	ZMIZ1	Q9ULJ6	1067 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	TBX20	Q9UMR3	447 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	WASF3	Q9UPY6	502 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	CCL26	Q9Y258	94 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	ACACA	Q13085	2346 aa		9.45	□□□□□ -0.9
NUP85-223	ENST00000583877	BPTF	Q12830	3046 aa		9.44	□□□□□ -0.9
NUP85-223	ENST00000583877	CELSR3	Q9NYQ7	3312 aa		9.44	□□□□□ -0.9
NUP85-223	ENST00000583877	LNP1	A1A4G5	178 aa		9.44	□□□□□ -0.9
NUP85-223	ENST00000583877	ANO9	A1A5B4	782 aa		9.44	□□□□□ -0.9
NUP85-223	ENST00000583877	TMEM8B	A6NDV4	472 aa		9.44	□□□□□ -0.9
NUP85-223	ENST00000583877	C4orf47	A7E2U8	309 aa		9.44	□□□□□ -0.9
NUP85-223	ENST00000583877	PP2D1	A8MPX8	630 aa		9.44	□□□□□ -0.9
NUP85-223	ENST00000583877	PIR	O00625	290 aa		9.44	□□□□□ -0.9
NUP85-223	ENST00000583877	GIPC1	O14908	333 aa		9.44	□□□□□ -0.9
NUP85-223	ENST00000583877	OGT	O15294	1046 aa		9.44	□□□□□ -0.9

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