RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 LPIN3Q9BQK8 851 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 SYT15Q9BQS2 421 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 CLSTN3Q9BQT9 956 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 C11orf84Q9BUA3 381 aaPredicted RBP14.53□□□□□ -0.08
ITGB4-209ENST00000583327 PUF60Q9UHX1 559 aaKnown RBP14.53□□□□□ -0.08
ITGB4-209ENST00000583327 NENFQ9UMX5 172 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 SSX2IPQ9Y2D8 614 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 RANBP2P49792 3224 aaKnown RBP14.53□□□□□ -0.08
ITGB4-209ENST00000583327 CHD9Q3L8U1 2897 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 O00370 1275 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 GRM6O15303 877 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 CLSTN1O94985 981 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 CFHP08603 1231 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 DNAJB2P25686 324 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 GNA15P30679 374 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 ERVFC1P60507 584 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 CCZ1BP86790 482 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 CCZ1P86791 482 aaPredicted RBP14.52□□□□□ -0.09
ITGB4-209ENST00000583327 FMO1Q01740 532 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 ARID5AQ03989 594 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 GPR17Q13304 367 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 ORC1Q13415 861 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 STILQ15468 1287 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 TSR1Q2NL82 804 aaKnown RBP14.52□□□□□ -0.09
ITGB4-209ENST00000583327 CTXN3Q4LDR2 81 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 PPP1R26Q5T8A7 1209 aaPredicted RBP14.52□□□□□ -0.09
ITGB4-209ENST00000583327 ZNF280DQ6N043 979 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 PRSS55Q6UWB4 352 aaPredicted RBP14.52□□□□□ -0.09
ITGB4-209ENST00000583327 TMTC1Q8IUR5 882 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 FUKQ8N0W3 1084 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 SLC20A1Q8WUM9 679 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 RIN2Q8WYP3 895 aaPredicted RBP14.52□□□□□ -0.09
ITGB4-209ENST00000583327 CYFIP2Q96F07 1278 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 BAG1Q99933 345 aaPredicted RBP14.52□□□□□ -0.09
ITGB4-209ENST00000583327 B3GNT5Q9BYG0 378 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 LHX5Q9H2C1 402 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 ALG13Q9NP73 1137 aaKnown RBP14.52□□□□□ -0.09
ITGB4-209ENST00000583327 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.52□□□□□ -0.09
ITGB4-209ENST00000583327 TMLHEQ9NVH6 421 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 ZNHIT6Q9NWK9 470 aaKnown RBP14.52□□□□□ -0.09
ITGB4-209ENST00000583327 GTF3C4Q9UKN8 822 aa14.52□□□□□ -0.09
ITGB4-209ENST00000583327 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.52□□□□□ -0.09
ITGB4-209ENST00000583327 COLQQ9Y215 455 aaPredicted RBP14.52□□□□□ -0.09
ITGB4-209ENST00000583327 NLRC5Q86WI3 1866 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 DDX3XO00571 662 aaKnown RBP eCLIP14.51□□□□□ -0.09
ITGB4-209ENST00000583327 ADAM12O43184 909 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 ABLIM3O94929 683 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 LCA5LO95447 670 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 C1RP00736 705 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 CDH5P33151 784 aaPredicted RBP14.51□□□□□ -0.09
ITGB4-209ENST00000583327 SMARCB1Q12824 385 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 RAB33AQ14088 237 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 PTPN14Q15678 1187 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 PSMD5Q16401 504 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 CCDC142Q17RM4 750 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 SGO2Q562F6 1265 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 CYP26C1Q6V0L0 522 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 CCDC170Q8IYT3 715 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 WDTC1Q8N5D0 677 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 MRPL43Q8N983 215 aaKnown RBP14.51□□□□□ -0.09
ITGB4-209ENST00000583327 FBXO22Q8NEZ5 403 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 POF1BQ8WVV4 589 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 TIFAQ96CG3 184 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 PCDHB18PQ96TA0 734 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 DNAI2Q9GZS0 605 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 KCNF1Q9H3M0 494 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 NHEJ1Q9H9Q4 299 aaPredicted RBP14.51□□□□□ -0.09
ITGB4-209ENST00000583327 SLC28A3Q9HAS3 691 aa14.51□□□□□ -0.09
ITGB4-209ENST00000583327 MRPL17Q9NRX2 175 aaKnown RBP14.51□□□□□ -0.09
ITGB4-209ENST00000583327 PLXNA4Q9HCM2 1894 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 MED7O43513 233 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 VNN2O95498 520 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 CXCL14O95715 111 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 CYP1A1P04798 512 aaPredicted RBP14.5□□□□□ -0.09
ITGB4-209ENST00000583327 MMEP08473 750 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 UNGP13051 313 aaPredicted RBP14.5□□□□□ -0.09
ITGB4-209ENST00000583327 BRD2P25440 801 aaKnown RBP14.5□□□□□ -0.09
ITGB4-209ENST00000583327 EIF4A3P38919 411 aaKnown RBP14.5□□□□□ -0.09
ITGB4-209ENST00000583327 GPD2P43304 727 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 PDE6CP51160 858 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 PSMC1P62191 440 aaKnown RBP14.5□□□□□ -0.09
ITGB4-209ENST00000583327 GPM6BQ13491 265 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 BMS1Q14692 1282 aaKnown RBP14.5□□□□□ -0.09
ITGB4-209ENST00000583327 MAPRE1Q15691 268 aaKnown RBP14.5□□□□□ -0.09
ITGB4-209ENST00000583327 NFE2Q16621 373 aaPredicted RBP14.5□□□□□ -0.09
ITGB4-209ENST00000583327 CFAP221Q4G0U5 840 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 PPP2R2DQ66LE6 453 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 PDE12Q6L8Q7 609 aaKnown RBP14.5□□□□□ -0.09
ITGB4-209ENST00000583327 KIAA1841Q6NSI8 718 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 LILRA6Q6PI73 481 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 GPIHBP1Q8IV16 184 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 DCP1BQ8IZD4 617 aaKnown RBP14.5□□□□□ -0.09
ITGB4-209ENST00000583327 ANKRD52Q8NB46 1076 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 CCDC112Q8NEF3 446 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 PCED1BQ96HM7 432 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 LMAN2LQ9H0V9 348 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 CSNK1G1Q9HCP0 422 aa14.5□□□□□ -0.09
ITGB4-209ENST00000583327 NGRNQ9NPE2 291 aaKnown RBP14.5□□□□□ -0.09
ITGB4-209ENST00000583327 A0A087X0T9 212 aa14.49□□□□□ -0.09
ITGB4-209ENST00000583327 EPOPA6NHQ4 379 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms