RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 APIPQ96GX9 242 aa5.45□□□□□ -1.54
NF1-220ENST00000581113 MOGAT1Q96PD6 335 aa5.45□□□□□ -1.54
NF1-220ENST00000581113 TTPALQ9BTX7 342 aa5.45□□□□□ -1.54
NF1-220ENST00000581113 TMPRSS5Q9H3S3 457 aa5.45□□□□□ -1.54
NF1-220ENST00000581113 KIAA1586Q9HCI6 787 aa5.45□□□□□ -1.54
NF1-220ENST00000581113 DDX21Q9NR30 783 aaKnown RBP eCLIP5.45□□□□□ -1.54
NF1-220ENST00000581113 STK32BQ9NY57 414 aa5.45□□□□□ -1.54
NF1-220ENST00000581113 DMTF1Q9Y222 760 aa5.45□□□□□ -1.54
NF1-220ENST00000581113 DCLK1O15075 740 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 CAND2O75155 1236 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 ATXN1LP0C7T5 689 aaKnown RBP5.44□□□□□ -1.54
NF1-220ENST00000581113 PPP3CBP16298 524 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 PXNP49023 591 aaPredicted RBP5.44□□□□□ -1.54
NF1-220ENST00000581113 ZNF134P52741 427 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 TBX4P57082 545 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 LILRA4P59901 499 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 BLOC1S1P78537 153 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 FMO1Q01740 532 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 RAB32Q13637 225 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 SLC44A4Q53GD3 710 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 CCDC181Q5TID7 509 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 Q6ZPA2 131 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 TSHZ1Q6ZSZ6 1077 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 LNX2Q8N448 690 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 B3GALNT2Q8NCR0 500 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 TOR1AIP2Q8NFQ8 470 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 UBE2Q2Q8WVN8 375 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 LPIN2Q92539 896 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 PRRX2Q99811 253 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 AIFM2Q9BRQ8 373 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 SARGQ9BW04 601 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 DPH1Q9BZG8 443 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 TPSD1Q9BZJ3 242 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 ZNF287Q9HBT7 754 aa5.44□□□□□ -1.54
NF1-220ENST00000581113 AFF4Q9UHB7 1163 aaKnown RBP5.44□□□□□ -1.54
NF1-220ENST00000581113 SPATA31A3Q5VYP0 1347 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 A0A087WWL8 130 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 GRID2IPA4D2P6 1211 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 TMEM233B4DJY2 109 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 AKAP8O43823 692 aaKnown RBP5.43□□□□□ -1.54
NF1-220ENST00000581113 PQBP1O60828 265 aaKnown RBP5.43□□□□□ -1.54
NF1-220ENST00000581113 KRT18P05783 430 aaKnown RBP5.43□□□□□ -1.54
NF1-220ENST00000581113 KRT4P19013 534 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 CD6P30203 668 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 VIPR2P41587 438 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 TAP1Q03518 808 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 HLTFQ14527 1009 aaKnown RBP eCLIP5.43□□□□□ -1.54
NF1-220ENST00000581113 C3orf38Q5JPI3 329 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 RAPGEF4Q8WZA2 1011 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 MAML1Q92585 1016 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 ZNF518BQ9C0D4 1074 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 NUP62CLQ9H1M0 184 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 PCED1AQ9H1Q7 454 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 SMURF2Q9HAU4 748 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 SYBUQ9NX95 663 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 KCTD5Q9NXV2 234 aa5.43□□□□□ -1.54
NF1-220ENST00000581113 YY2O15391 372 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 PEX1O43933 1283 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 RAMP2O60895 175 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 SLPIP03973 132 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 SRGNP10124 158 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 LOXL3P58215 753 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 SATB1Q01826 763 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 SAFBQ15424 915 aaKnown RBP eCLIP5.42□□□□□ -1.54
NF1-220ENST00000581113 HECTD2Q5U5R9 776 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 VPS53Q5VIR6 699 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 Q6ZNX1 250 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 MRGPRGQ86SM5 289 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 LDLRAD3Q86YD5 345 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.42□□□□□ -1.54
NF1-220ENST00000581113 AMER2Q8N7J2 671 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 MYCBPAPQ8TBZ2 947 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 ACTRT3Q9BYD9 372 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 MS4A7Q9GZW8 240 aaPredicted RBP5.42□□□□□ -1.54
NF1-220ENST00000581113 SHOC2Q9UQ13 582 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.42□□□□□ -1.54
NF1-220ENST00000581113 SNX13Q9Y5W8 968 aa5.42□□□□□ -1.54
NF1-220ENST00000581113 EPN1Q9Y6I3 576 aaPredicted RBP5.42□□□□□ -1.54
NF1-220ENST00000581113 MAST3O60307 1309 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 APAF1O14727 1248 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 FOXN1O15353 648 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 CYP2C9P11712 490 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 XRCC6P12956 609 aaKnown RBP eCLIP5.41□□□□□ -1.54
NF1-220ENST00000581113 TRIM27P14373 513 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 TGM1P22735 817 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 HNRNPMP52272 730 aaKnown RBP eCLIP5.41□□□□□ -1.54
NF1-220ENST00000581113 SEC24CP53992 1094 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 PURAQ00577 322 aaKnown RBP5.41□□□□□ -1.54
NF1-220ENST00000581113 KRT17Q04695 432 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 MPP3Q13368 585 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 DCAF12L1Q5VU92 463 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 VWA1Q6PCB0 445 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 SESTD1Q86VW0 696 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 LINC00476Q8WZB0 136 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 FBXL20Q96IG2 436 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 COQ10AQ96MF6 247 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 OSBPL9Q96SU4 736 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 KRTAP4-9Q9BYQ8 210 aa5.41□□□□□ -1.54
NF1-220ENST00000581113 A1CFQ9NQ94 594 aaKnown RBP5.41□□□□□ -1.54
NF1-220ENST00000581113 CORO2BQ9UQ03 480 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms