RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 CAPSQ13938 189 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 C7orf31Q8N865 590 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 UTP4Q969X6 686 aaKnown RBP15.58■□□□□ 0.08
PRPF8-216ENST00000577001 MOCOSQ96EN8 888 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 LRRC37BQ96QE4 947 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 IWS1Q96ST2 819 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 GMLQ99445 158 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 PPP1R12CQ9BZL4 782 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 CXCL16Q9H2A7 254 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 G3BP2Q9UN86 482 aaKnown RBP15.58■□□□□ 0.08
PRPF8-216ENST00000577001 MAD1L1Q9Y6D9 718 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 UBE4BO95155 1302 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 CYP1B1Q16678 543 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 LRRC36Q1X8D7 754 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 PLEKHG4Q58EX7 1191 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 SWT1Q5T5J6 900 aaKnown RBP15.58■□□□□ 0.08
PRPF8-216ENST00000577001 STYK1Q6J9G0 422 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 GADL1Q6ZQY3 521 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 SCYL3Q8IZE3 742 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 YIPF3Q9GZM5 350 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 SMYD3Q9H7B4 428 aa15.58■□□□□ 0.08
PRPF8-216ENST00000577001 GGPS1O95749 300 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 RAD23BP54727 409 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 TRAF1Q13077 416 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 HSDL1Q3SXM5 330 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 PTPN20Q4JDL3 420 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 WDTC1Q8N5D0 677 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 EIF1ADQ8N9N8 165 aaKnown RBP15.57■□□□□ 0.08
PRPF8-216ENST00000577001 SHKBP1Q8TBC3 707 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 GRK7Q8WTQ7 553 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 CYTH2Q99418 400 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 TMEM63AO94886 807 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 GM2AP17900 193 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 BGNP21810 368 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 GPX6P59796 221 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 SETDB1Q15047 1291 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 ZNF699Q32M78 642 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 TREML2Q5T2D2 321 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 NDRG1Q92597 394 aaKnown RBP15.57■□□□□ 0.08
PRPF8-216ENST00000577001 ACAP3Q96P50 834 aa15.57■□□□□ 0.08
PRPF8-216ENST00000577001 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.57■□□□□ 0.08
PRPF8-216ENST00000577001 STAM2O75886 525 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 DNAJC8O75937 253 aaPredicted RBP15.56■□□□□ 0.08
PRPF8-216ENST00000577001 KRT3P12035 628 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 SPARCL1Q14515 664 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 LACTB2Q53H82 288 aaPredicted RBP15.56■□□□□ 0.08
PRPF8-216ENST00000577001 GLRA4Q5JXX5 417 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 DARS2Q6PI48 645 aaKnown RBP15.56■□□□□ 0.08
PRPF8-216ENST00000577001 OTOAQ7RTW8 1153 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 SESTD1Q86VW0 696 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 ZNF570Q96NI8 536 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 CPXM1Q96SM3 734 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 P4HA2O15460 535 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 TCF7P36402 384 aaPredicted RBP15.56■□□□□ 0.08
PRPF8-216ENST00000577001 CETN2P41208 172 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 GTF2A2P52657 109 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 KLF1Q13351 362 aaPredicted RBP15.56■□□□□ 0.08
PRPF8-216ENST00000577001 TAF11Q15544 211 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 NFIL3Q16649 462 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 HIF1AQ16665 826 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 OR6B2Q6IFH4 312 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 CES3Q6UWW8 571 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 USP37Q86T82 979 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 PRPF39Q86UA1 669 aaKnown RBP15.56■□□□□ 0.08
PRPF8-216ENST00000577001 CLPTM1LQ96KA5 538 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 HEXIM2Q96MH2 286 aaKnown RBP15.56■□□□□ 0.08
PRPF8-216ENST00000577001 PARVAQ9NVD7 372 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 CYP39A1Q9NYL5 469 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 XPO7Q9UIA9 1087 aaKnown RBP15.56■□□□□ 0.08
PRPF8-216ENST00000577001 ANKRD31Q8N7Z5 1873 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 RFX1P22670 979 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 PCK1P35558 622 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 MMP19Q99542 508 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 MINDY3Q9H8M7 445 aa15.56■□□□□ 0.08
PRPF8-216ENST00000577001 STBD1O95210 358 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 RPL22P35268 128 aaKnown RBP15.55■□□□□ 0.08
PRPF8-216ENST00000577001 ELK3P41970 407 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 CENPCQ03188 943 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 CCNG2Q16589 344 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 CCDC142Q17RM4 750 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 ZC3H12AQ5D1E8 599 aaKnown RBP15.55■□□□□ 0.08
PRPF8-216ENST00000577001 FAM102AQ5T9C2 384 aaPredicted RBP15.55■□□□□ 0.08
PRPF8-216ENST00000577001 TRABD2AQ86V40 505 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 SPDL1Q96EA4 605 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 TEPSINQ96N21 525 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 NUDCD1Q96RS6 583 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 PAFAH2Q99487 392 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 MRPL47Q9HD33 250 aaKnown RBP15.55■□□□□ 0.08
PRPF8-216ENST00000577001 ANKEF1Q9NU02 776 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 STK32BQ9NY57 414 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 RBP3P10745 1247 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 PYGBP11216 843 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 GRIA1P42261 906 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 CDH6P55285 790 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 BACE1P56817 501 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 KDSRQ06136 332 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 FAAP100Q0VG06 881 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 OLIG2Q13516 323 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 ITIH4Q14624 930 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 ZNF568Q3ZCX4 644 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms