RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 HDAC7Q8WUI4 952 aa17.35■□□□□ 0.37
PFN1-203ENST00000574872 MYLPFQ96A32 169 aa17.35■□□□□ 0.37
PFN1-203ENST00000574872 TWNKQ96RR1 684 aa17.35■□□□□ 0.37
PFN1-203ENST00000574872 PKMYT1Q99640 499 aa17.35■□□□□ 0.37
PFN1-203ENST00000574872 SEPT5Q99719 369 aaPredicted RBP17.35■□□□□ 0.37
PFN1-203ENST00000574872 RHOBTB2Q9BYZ6 727 aa17.35■□□□□ 0.37
PFN1-203ENST00000574872 CISHQ9NSE2 258 aa17.35■□□□□ 0.37
PFN1-203ENST00000574872 DPP7Q9UHL4 492 aa17.35■□□□□ 0.37
PFN1-203ENST00000574872 CCDC195A0A1B0GUA6 201 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 GTPBP10A4D1E9 387 aaKnown RBP17.34■□□□□ 0.37
PFN1-203ENST00000574872 CILPO75339 1184 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 CAVIN2O95810 425 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 PTPN1P18031 435 aaKnown RBP17.34■□□□□ 0.37
PFN1-203ENST00000574872 PON1P27169 355 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 CYP27A1Q02318 531 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 INCA1Q0VD86 236 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 NFE2Q16621 373 aaPredicted RBP17.34■□□□□ 0.37
PFN1-203ENST00000574872 LEXMQ3ZCV2 418 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 ZNF394Q53GI3 561 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 PHLDB3Q6NSJ2 640 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 GJB7Q6PEY0 223 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 CCDC149Q6ZUS6 474 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 SPATA2LQ8IUW3 424 aaPredicted RBP17.34■□□□□ 0.37
PFN1-203ENST00000574872 TCEAL8Q8IYN2 117 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 B3GALNT2Q8NCR0 500 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 SMRP1Q8NCR6 262 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 ELOVL4Q9GZR5 314 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 S1PR5Q9H228 398 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 YIPF1Q9Y548 306 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 PCDHB5Q9Y5E4 795 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 INSL5Q9Y5Q6 135 aa17.34■□□□□ 0.37
PFN1-203ENST00000574872 GRXCR2A6NFK2 248 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 GOLGA6L19H0YKK7 550 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 TBXAS1P24557 533 aaPredicted RBP17.33■□□□□ 0.36
PFN1-203ENST00000574872 KCNQ1P51787 676 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 ZNF445P59923 1031 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 TPM4P67936 248 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 TWF1Q12792 350 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 MGAT5BQ3V5L5 792 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 FKBP15Q5T1M5 1219 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 FAM171BQ6P995 826 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 APTXQ7Z2E3 356 aaKnown RBP17.33■□□□□ 0.36
PFN1-203ENST00000574872 UNC93AQ86WB7 457 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 RNF214Q8ND24 703 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.33■□□□□ 0.36
PFN1-203ENST00000574872 MYCBPAPQ8TBZ2 947 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 WHAMMQ8TF30 809 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 ZNF707Q96C28 371 aaPredicted RBP17.33■□□□□ 0.36
PFN1-203ENST00000574872 PCED1BQ96HM7 432 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 FAXDC2Q96IV6 333 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 TNIP3Q96KP6 325 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 LSM14BQ9BX40 385 aaKnown RBP17.33■□□□□ 0.36
PFN1-203ENST00000574872 NT5C1AQ9BXI3 368 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 UBE2TQ9NPD8 197 aaPredicted RBP17.33■□□□□ 0.36
PFN1-203ENST00000574872 FAM49BQ9NUQ9 324 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 ZDHHC7Q9NXF8 308 aa17.33■□□□□ 0.36
PFN1-203ENST00000574872 USP15Q9Y4E8 981 aaPredicted RBP17.33■□□□□ 0.36
PFN1-203ENST00000574872 MTCL1Q9Y4B5 1905 aaKnown RBP17.33■□□□□ 0.36
PFN1-203ENST00000574872 LGALS16A8MUM7 142 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 CLDN5O00501 218 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 LRG1P02750 347 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 CCDC130P13994 396 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 CYP2F1P24903 491 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 GPR15P49685 360 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 KLK7P49862 253 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 KCNMA1Q12791 1236 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 SMARCB1Q12824 385 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 SMAD4Q13485 552 aaKnown RBP17.32■□□□□ 0.36
PFN1-203ENST00000574872 UVSSAQ2YD98 709 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 PTCRAQ6ISU1 281 aaPredicted RBP17.32■□□□□ 0.36
PFN1-203ENST00000574872 CES5AQ6NT32 575 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 C12orf29Q8N999 325 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 CMASQ8NFW8 434 aaPredicted RBP17.32■□□□□ 0.36
PFN1-203ENST00000574872 SPPL2BQ8TCT7 592 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 C2orf15Q8WU43 125 aaKnown RBP17.32■□□□□ 0.36
PFN1-203ENST00000574872 SMG7Q92540 1137 aaKnown RBP17.32■□□□□ 0.36
PFN1-203ENST00000574872 KREMEN1Q96MU8 473 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 PRKD2Q9BZL6 878 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 ADAM7Q9H2U9 754 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 PIDD1Q9HB75 910 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 SIX2Q9NPC8 291 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 APEX2Q9UBZ4 518 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 MAFFQ9ULX9 164 aa17.32■□□□□ 0.36
PFN1-203ENST00000574872 MBTPS2O43462 519 aa17.31■□□□□ 0.36
PFN1-203ENST00000574872 HNRNPA1P09651 372 aaKnown RBP eCLIP17.31■□□□□ 0.36
PFN1-203ENST00000574872 HAPLN1P10915 354 aaPredicted RBP17.31■□□□□ 0.36
PFN1-203ENST00000574872 BDNFP23560 247 aa17.31■□□□□ 0.36
PFN1-203ENST00000574872 YWHAEP62258 255 aaKnown RBP17.31■□□□□ 0.36
PFN1-203ENST00000574872 GCNT1Q02742 428 aa17.31■□□□□ 0.36
PFN1-203ENST00000574872 UBXN1Q04323 297 aa17.31■□□□□ 0.36
PFN1-203ENST00000574872 ITIH3Q06033 890 aa17.31■□□□□ 0.36
PFN1-203ENST00000574872 MAPRE1Q15691 268 aaKnown RBP17.31■□□□□ 0.36
PFN1-203ENST00000574872 PTPN21Q16825 1174 aa17.31■□□□□ 0.36
PFN1-203ENST00000574872 SDHAF4Q5VUM1 108 aa17.31■□□□□ 0.36
PFN1-203ENST00000574872 C4orf50Q6ZRC1 276 aa17.31■□□□□ 0.36
PFN1-203ENST00000574872 GPR149Q86SP6 731 aa17.31■□□□□ 0.36
PFN1-203ENST00000574872 SCN4BQ8IWT1 228 aa17.31■□□□□ 0.36
PFN1-203ENST00000574872 UBR7Q8N806 425 aa17.31■□□□□ 0.36
PFN1-203ENST00000574872 MED10Q9BTT4 135 aa17.31■□□□□ 0.36
PFN1-203ENST00000574872 B3GNT5Q9BYG0 378 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms