RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 ADAM15Q13444 863 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 ERV3-1Q14264 604 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 EIF4HQ15056 248 aaKnown RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 ANKRD1Q15327 319 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 RPS6KA2Q15349 733 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 NPY5RQ15761 445 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 TSTQ16762 297 aaKnown RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 ZNF827Q17R98 1081 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 INSCQ1MX18 579 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 SLC5A9Q2M3M2 681 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 CRB2Q5IJ48 1285 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 FAM47AQ5JRC9 791 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 LCE2AQ5TA79 106 aaPredicted RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 OTUD7BQ6GQQ9 843 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 MRNIPQ6NTE8 343 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 RINT1Q6NUQ1 792 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 NFRKBQ6P4R8 1299 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 B4GALNT4Q76KP1 1039 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 RAB11FIP2Q7L804 512 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 R3HCC1LQ7Z5L2 792 aaKnown RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 ANKS1BQ7Z6G8 1248 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 STK32CQ86UX6 486 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 RASGRP3Q8IV61 690 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 RTKN2Q8IZC4 609 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 TTC30BQ8N4P2 665 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 OR5M3Q8NGP4 307 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 CPT1CQ8TCG5 803 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 TBC1D22AQ8WUA7 517 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 WDR60Q8WVS4 1066 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 GCDHQ92947 438 aaPredicted RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 C3orf49Q96BT1 292 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 RNF125Q96EQ8 232 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 NEIL1Q96FI4 390 aaPredicted RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 ZSWIM3Q96MP5 696 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 SYT3Q9BQG1 590 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 MRI1Q9BV20 369 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 CPEB1Q9BZB8 566 aaKnown RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 SIK2Q9H0K1 926 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 GHITMQ9H3K2 345 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 ABHD16BQ9H3Z7 469 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 ELAC1Q9H777 363 aaKnown RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 GPR35Q9HC97 309 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 ZBTB26Q9HCK0 441 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 PCDH18Q9HCL0 1135 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 ZCCHC17Q9NP64 241 aaKnown RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 TPSG1Q9NRR2 321 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 TMOD4Q9NZQ9 345 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 PI4KBQ9UBF8 816 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 SLC23A1Q9UHI7 598 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 VPS28Q9UK41 221 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 CROTQ9UKG9 612 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 TBX20Q9UMR3 447 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 DAPP1Q9UN19 280 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 YBX2Q9Y2T7 364 aaKnown RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 DERAQ9Y315 318 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 CTDP1Q9Y5B0 961 aaPredicted RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 RBM8AQ9Y5S9 174 aaKnown RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 MAGED1Q9Y5V3 778 aaPredicted RBP2.36□□□□□ -2.03
CHD3-217ENST00000574022 CYP46A1Q9Y6A2 500 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 RPGRIP1LQ68CZ1 1315 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 ZMYM3Q14202 1370 aa2.36□□□□□ -2.03
CHD3-217ENST00000574022 C2orf78A6NCI8 922 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 OR14I1A6ND48 311 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 TSPY2A6NKD2 308 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 AQP7P3A6NL99 342 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 EFCAB8A8MWE9 144 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 M0QYG6 137 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 PCDH17O14917 1159 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 SPTLC2O15270 562 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 P4HA2O15460 535 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 CCP110O43303 1012 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 CCNT2O60583 730 aaKnown RBP2.35□□□□□ -2.03
CHD3-217ENST00000574022 TSPAN3O60637 253 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 COBLO75128 1261 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 CYP7B1O75881 506 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 URI1O94763 535 aaPredicted RBP2.35□□□□□ -2.03
CHD3-217ENST00000574022 STARD3NLO95772 234 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 CHEK2O96017 543 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 KNG1P01042 644 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 VIPP01282 170 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 HMGCRP04035 888 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 PROCP04070 461 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 ANXA6P08133 673 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 CNPP09543 421 aaKnown RBP2.35□□□□□ -2.03
CHD3-217ENST00000574022 H2AFB1P0C5Y9 115 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 H2AFB2P0C5Z0 115 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 TSPY3P0CV98 308 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 TSPY8P0CW00 308 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 PIM1P11309 404 aaPredicted RBP2.35□□□□□ -2.03
CHD3-217ENST00000574022 AKR1B1P15121 316 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 PFKLP17858 780 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 KLRK1P26718 216 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 AKT1P31749 480 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 HOXD13P35453 343 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 ACTN2P35609 894 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 CASRP41180 1078 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 KCNC1P48547 511 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 PTDSS1P48651 473 aaKnown RBP2.35□□□□□ -2.03
CHD3-217ENST00000574022 CCR9P51686 369 aa2.35□□□□□ -2.03
CHD3-217ENST00000574022 ZNF135P52742 658 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms