RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 SMAD2Q15796 467 aaKnown RBP18.42■□□□□ 0.54
LITAF-212ENST00000573332 CLUL1Q15846 466 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 CFAP221Q4G0U5 840 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 ATAT1Q5SQI0 421 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 PTCRAQ6ISU1 281 aaPredicted RBP18.42■□□□□ 0.54
LITAF-212ENST00000573332 TMC5Q6UXY8 1006 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 DHX40Q8IX18 779 aaKnown RBP18.42■□□□□ 0.54
LITAF-212ENST00000573332 MYCBPAPQ8TBZ2 947 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 TNIP3Q96KP6 325 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 RIPOR3Q96MK2 946 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 NT5C1BQ96P26 610 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 PGLYRP2Q96PD5 576 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 CRISPLD1Q9H336 500 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.42■□□□□ 0.54
LITAF-212ENST00000573332 LIMA1Q9UHB6 759 aaKnown RBP18.42■□□□□ 0.54
LITAF-212ENST00000573332 USP15Q9Y4E8 981 aaPredicted RBP18.42■□□□□ 0.54
LITAF-212ENST00000573332 PCDHB5Q9Y5E4 795 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 ATP2C2O75185 946 aa18.41■□□□□ 0.54
LITAF-212ENST00000573332 CILPO75339 1184 aa18.41■□□□□ 0.54
LITAF-212ENST00000573332 BMP1P13497 986 aa18.41■□□□□ 0.54
LITAF-212ENST00000573332 MTHFRP42898 656 aa18.41■□□□□ 0.54
LITAF-212ENST00000573332 NDST1P52848 882 aa18.41■□□□□ 0.54
LITAF-212ENST00000573332 KRT31Q15323 416 aa18.41■□□□□ 0.54
LITAF-212ENST00000573332 SMYD5Q6GMV2 418 aa18.41■□□□□ 0.54
LITAF-212ENST00000573332 GBP6Q6ZN66 633 aa18.41■□□□□ 0.54
LITAF-212ENST00000573332 C4orf50Q6ZRC1 276 aa18.41■□□□□ 0.54
LITAF-212ENST00000573332 NECTIN4Q96NY8 510 aa18.41■□□□□ 0.54
LITAF-212ENST00000573332 INTS2Q9H0H0 1204 aaKnown RBP18.41■□□□□ 0.54
LITAF-212ENST00000573332 XYLBO75191 536 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 LRG1P02750 347 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 HAPLN1P10915 354 aaPredicted RBP18.4■□□□□ 0.54
LITAF-212ENST00000573332 KCNQ1P51787 676 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 PSMC1P62191 440 aaKnown RBP18.4■□□□□ 0.54
LITAF-212ENST00000573332 YWHAEP62258 255 aaKnown RBP18.4■□□□□ 0.54
LITAF-212ENST00000573332 GCNT1Q02742 428 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 PLD1Q13393 1074 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 CBX2Q14781 532 aaPredicted RBP18.4■□□□□ 0.54
LITAF-212ENST00000573332 EXOC3L4Q17RC7 722 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 UBR7Q8N806 425 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 B3GALNT2Q8NCR0 500 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 ANKRD20A12PQ8NF67 263 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 WHAMMQ8TF30 809 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 SMG7Q92540 1137 aaKnown RBP18.4■□□□□ 0.54
LITAF-212ENST00000573332 JAKMIP2Q96AA8 810 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 APOL5Q9BWW9 433 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 NT5C1AQ9BXI3 368 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 DPEP3Q9H4B8 488 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 CISHQ9NSE2 258 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 GCNT4Q9P109 453 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 YIPF1Q9Y548 306 aa18.4■□□□□ 0.54
LITAF-212ENST00000573332 BRWD1Q9NSI6 2320 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 BECN2A8MW95 431 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 TPM2P07951 284 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 MAGEA11P43364 429 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 LRMPQ12912 555 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 PHLDB3Q6NSJ2 640 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 TRIM65Q6PJ69 517 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 SPATA2LQ8IUW3 424 aaPredicted RBP18.39■□□□□ 0.53
LITAF-212ENST00000573332 TTC9BQ8N6N2 239 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 PCED1BQ96HM7 432 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 FAM81BQ96LP2 452 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 ARID3AQ99856 593 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 DNAI2Q9GZS0 605 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 CBX8Q9HC52 389 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 ABI2Q9NYB9 513 aaPredicted RBP18.39■□□□□ 0.53
LITAF-212ENST00000573332 TAB2Q9NYJ8 693 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 SLC27A5Q9Y2P5 690 aa18.39■□□□□ 0.53
LITAF-212ENST00000573332 PRUNE2Q8WUY3 3088 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 CCL16O15467 120 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 CD58P19256 250 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 TRIM21P19474 475 aaKnown RBP18.38■□□□□ 0.53
LITAF-212ENST00000573332 SLC9A1P19634 815 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 CDK11BP21127 795 aaKnown RBP18.38■□□□□ 0.53
LITAF-212ENST00000573332 PON1P27169 355 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 ALDH1A3P47895 512 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 COPB1P53618 953 aaKnown RBP18.38■□□□□ 0.53
LITAF-212ENST00000573332 TWF1Q12792 350 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 CCDC142Q17RM4 750 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 MGAT5BQ3V5L5 792 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 MDH1BQ5I0G3 518 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 LRSAM1Q6UWE0 723 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 VSTM1Q6UX27 236 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 ENOSF1Q7L5Y1 443 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 APTXQ7Z2E3 356 aaKnown RBP18.38■□□□□ 0.53
LITAF-212ENST00000573332 ACOT1Q86TX2 421 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 PPM1KQ8N3J5 372 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 FEZF2Q8TBJ5 459 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 MYLPFQ96A32 169 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 CEP295NLQ96MC4 621 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 TWNKQ96RR1 684 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 CRACR2AQ9BSW2 395 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 PIDD1Q9HB75 910 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 WDR6Q9NNW5 1121 aaKnown RBP18.38■□□□□ 0.53
LITAF-212ENST00000573332 AVENQ9NQS1 362 aaPredicted RBP18.38■□□□□ 0.53
LITAF-212ENST00000573332 PRKAG3Q9UGI9 489 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 HMGXB4Q9UGU5 601 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 ASB3Q9Y575 518 aa18.38■□□□□ 0.53
LITAF-212ENST00000573332 MTCL1Q9Y4B5 1905 aaKnown RBP18.38■□□□□ 0.53
LITAF-212ENST00000573332 IL9P15248 144 aa18.37■□□□□ 0.53
LITAF-212ENST00000573332 PTPN2P17706 415 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms