RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 CDK5RAP3Q96JB5 506 aa20.71■□□□□ 0.91
NUP88-203ENST00000572019 GCNAQ96QF7 691 aa20.71■□□□□ 0.91
NUP88-203ENST00000572019 DUSP15Q9H1R2 295 aaPredicted RBP20.71■□□□□ 0.91
NUP88-203ENST00000572019 THG1LQ9NWX6 298 aaKnown RBP20.71■□□□□ 0.91
NUP88-203ENST00000572019 DPP3Q9NY33 737 aa20.71■□□□□ 0.91
NUP88-203ENST00000572019 SLC8A2Q9UPR5 921 aa20.71■□□□□ 0.91
NUP88-203ENST00000572019 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.71■□□□□ 0.91
NUP88-203ENST00000572019 MYOFQ9NZM1 2061 aa20.7■□□□□ 0.9
NUP88-203ENST00000572019 HCRTO43612 131 aa20.7■□□□□ 0.9
NUP88-203ENST00000572019 TRAK2O60296 914 aa20.7■□□□□ 0.9
NUP88-203ENST00000572019 GRSF1Q12849 480 aaKnown RBP eCLIP20.7■□□□□ 0.9
NUP88-203ENST00000572019 RILPL1Q5EBL4 403 aa20.7■□□□□ 0.9
NUP88-203ENST00000572019 ZC3H10Q96K80 434 aaKnown RBP20.7■□□□□ 0.9
NUP88-203ENST00000572019 TSPAN18Q96SJ8 248 aa20.7■□□□□ 0.9
NUP88-203ENST00000572019 PI4K2AQ9BTU6 479 aa20.7■□□□□ 0.9
NUP88-203ENST00000572019 ZHX3Q9H4I2 956 aa20.7■□□□□ 0.9
NUP88-203ENST00000572019 PARVGQ9HBI0 331 aa20.7■□□□□ 0.9
NUP88-203ENST00000572019 TDP1Q9NUW8 608 aa20.7■□□□□ 0.9
NUP88-203ENST00000572019 MAGED2Q9UNF1 606 aaPredicted RBP20.7■□□□□ 0.9
NUP88-203ENST00000572019 CCDC163A0A0D9SF12 145 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 GIPC1O14908 333 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 FOXD2O60548 495 aaPredicted RBP20.69■□□□□ 0.9
NUP88-203ENST00000572019 KCNK5O95279 499 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 PLCG1P19174 1290 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 GJA4P35212 333 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 AVPR1AP37288 418 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 TAF6P49848 677 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 SHC2P98077 582 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 GTF2BQ00403 316 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 KARSQ15046 597 aaKnown RBP20.69■□□□□ 0.9
NUP88-203ENST00000572019 TAF12Q16514 161 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 CD302Q8IX05 232 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 SPPL2BQ8TCT7 592 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 DDX1Q92499 740 aaKnown RBP20.69■□□□□ 0.9
NUP88-203ENST00000572019 LSM14BQ9BX40 385 aaKnown RBP20.69■□□□□ 0.9
NUP88-203ENST00000572019 INVSQ9Y283 1065 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 DERAQ9Y315 318 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 C2CD2Q9Y426 696 aa20.69■□□□□ 0.9
NUP88-203ENST00000572019 ACAT1P24752 427 aaKnown RBP20.68■□□□□ 0.9
NUP88-203ENST00000572019 ADSSP30520 456 aa20.68■□□□□ 0.9
NUP88-203ENST00000572019 BFSP1Q12934 665 aa20.68■□□□□ 0.9
NUP88-203ENST00000572019 DDR2Q16832 855 aa20.68■□□□□ 0.9
NUP88-203ENST00000572019 ADALQ6DHV7 355 aa20.68■□□□□ 0.9
NUP88-203ENST00000572019 METTL23Q86XA0 190 aa20.68■□□□□ 0.9
NUP88-203ENST00000572019 RPLP0P6Q8NHW5 317 aa20.68■□□□□ 0.9
NUP88-203ENST00000572019 CYP2S1Q96SQ9 504 aa20.68■□□□□ 0.9
NUP88-203ENST00000572019 CCSER1Q9C0I3 900 aa20.68■□□□□ 0.9
NUP88-203ENST00000572019 DSEQ9UL01 958 aa20.68■□□□□ 0.9
NUP88-203ENST00000572019 STYXL1Q9Y6J8 313 aa20.68■□□□□ 0.9
NUP88-203ENST00000572019 KPNA7A9QM74 516 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 CYP2F1P24903 491 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 KCNA1Q09470 495 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 PSAPL1Q6NUJ1 521 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 MON1AQ86VX9 555 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 OSTM1Q86WC4 334 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 THEM5Q8N1Q8 247 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 KCTD17Q8N5Z5 321 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 TTC16Q8NEE8 873 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 C2orf15Q8WU43 125 aaKnown RBP20.67■□□□□ 0.9
NUP88-203ENST00000572019 RAD54LQ92698 747 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 PKMYT1Q99640 499 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 P2RY13Q9BPV8 354 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 ASB7Q9H672 318 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 AGO2Q9UKV8 859 aaKnown RBP20.67■□□□□ 0.9
NUP88-203ENST00000572019 PCDHB5Q9Y5E4 795 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 WNT6Q9Y6F9 365 aa20.67■□□□□ 0.9
NUP88-203ENST00000572019 ASCC3Q8N3C0 2202 aaKnown RBP20.67■□□□□ 0.9
NUP88-203ENST00000572019 IGF2RP11717 2491 aa20.66■□□□□ 0.9
NUP88-203ENST00000572019 ATG13O75143 517 aa20.66■□□□□ 0.9
NUP88-203ENST00000572019 PRPF40AO75400 957 aaKnown RBP20.66■□□□□ 0.9
NUP88-203ENST00000572019 MTF1Q14872 753 aa20.66■□□□□ 0.9
NUP88-203ENST00000572019 ZNF77Q15935 545 aa20.66■□□□□ 0.9
NUP88-203ENST00000572019 ARL6IP4Q66PJ3 421 aaKnown RBP20.66■□□□□ 0.9
NUP88-203ENST00000572019 RNF43Q68DV7 783 aa20.66■□□□□ 0.9
NUP88-203ENST00000572019 PDCL2Q8N4E4 241 aa20.66■□□□□ 0.9
NUP88-203ENST00000572019 ECT2Q9H8V3 914 aa20.66■□□□□ 0.9
NUP88-203ENST00000572019 L1RE1Q9UN81 338 aa20.66■□□□□ 0.9
NUP88-203ENST00000572019 PCDHGA5Q9Y5G8 931 aa20.66■□□□□ 0.9
NUP88-203ENST00000572019 TNRC6BQ9UPQ9 1833 aaKnown RBP20.66■□□□□ 0.9
NUP88-203ENST00000572019 GON4LQ3T8J9 2241 aa20.66■□□□□ 0.9
NUP88-203ENST00000572019 C1QTNF9BB2RNN3 333 aa20.65■□□□□ 0.9
NUP88-203ENST00000572019 AKAP3O75969 853 aa20.65■□□□□ 0.9
NUP88-203ENST00000572019 TOP3BO95985 862 aaKnown RBP20.65■□□□□ 0.9
NUP88-203ENST00000572019 C1QTNF9P0C862 333 aa20.65■□□□□ 0.9
NUP88-203ENST00000572019 PAX3P23760 479 aa20.65■□□□□ 0.9
NUP88-203ENST00000572019 CREB5Q02930 508 aa20.65■□□□□ 0.9
NUP88-203ENST00000572019 DMC1Q14565 340 aa20.65■□□□□ 0.9
NUP88-203ENST00000572019 PTPAQ15257 358 aa20.65■□□□□ 0.9
NUP88-203ENST00000572019 CAMKK1Q8N5S9 505 aa20.65■□□□□ 0.9
NUP88-203ENST00000572019 CXorf38Q8TB03 319 aa20.65■□□□□ 0.9
NUP88-203ENST00000572019 KIF9Q9HAQ2 790 aa20.65■□□□□ 0.9
NUP88-203ENST00000572019 TRPC7Q9HCX4 862 aa20.65■□□□□ 0.9
NUP88-203ENST00000572019 VPS45Q9NRW7 570 aa20.65■□□□□ 0.9
NUP88-203ENST00000572019 C4orf47A7E2U8 309 aa20.64■□□□□ 0.89
NUP88-203ENST00000572019 NOL4O94818 638 aa20.64■□□□□ 0.89
NUP88-203ENST00000572019 CD2BP2O95400 341 aaKnown RBP20.64■□□□□ 0.89
NUP88-203ENST00000572019 KRT18P05783 430 aaKnown RBP20.64■□□□□ 0.89
NUP88-203ENST00000572019 SPINK2P20155 84 aa20.64■□□□□ 0.89
NUP88-203ENST00000572019 DRD1P21728 446 aa20.64■□□□□ 0.89
NUP88-203ENST00000572019 DDX6P26196 483 aaKnown RBP eCLIP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms