RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 GPS2Q13227 327 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 ZNF211Q13398 564 aaPredicted RBP18.36■□□□□ 0.53
RPAIN-208ENST00000571043 NNTQ13423 1086 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 DSC3Q14574 896 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 TFAP2BQ92481 460 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 VWCEQ96DN2 955 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 TRAIPQ9BWF2 469 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 PLVAPQ9BX97 442 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 SDCBP2Q9H190 292 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 EPB41L5Q9HCM4 733 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 SNTG2Q9NY99 539 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 CITO14578 2027 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 RAD23BP54727 409 aa18.35■□□□□ 0.53
RPAIN-208ENST00000571043 SMC1AQ14683 1233 aaKnown RBP18.35■□□□□ 0.53
RPAIN-208ENST00000571043 ZBTB6Q15916 424 aa18.35■□□□□ 0.53
RPAIN-208ENST00000571043 UBXN11Q5T124 520 aa18.35■□□□□ 0.53
RPAIN-208ENST00000571043 DBF4BQ8NFT6 615 aa18.35■□□□□ 0.53
RPAIN-208ENST00000571043 FEZF2Q8TBJ5 459 aa18.35■□□□□ 0.53
RPAIN-208ENST00000571043 WHAMMQ8TF30 809 aa18.35■□□□□ 0.53
RPAIN-208ENST00000571043 SEPT8Q92599 483 aa18.35■□□□□ 0.53
RPAIN-208ENST00000571043 CAVIN3Q969G5 261 aa18.35■□□□□ 0.53
RPAIN-208ENST00000571043 FTHL17Q9BXU8 183 aa18.35■□□□□ 0.53
RPAIN-208ENST00000571043 EIF2AQ9BY44 585 aaKnown RBP18.35■□□□□ 0.53
RPAIN-208ENST00000571043 SMYD3Q9H7B4 428 aa18.35■□□□□ 0.53
RPAIN-208ENST00000571043 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.35■□□□□ 0.53
RPAIN-208ENST00000571043 PRKAG2Q9UGJ0 569 aa18.35■□□□□ 0.53
RPAIN-208ENST00000571043 CEP290O15078 2479 aa18.35■□□□□ 0.53
RPAIN-208ENST00000571043 MGEA5O60502 916 aa18.34■□□□□ 0.53
RPAIN-208ENST00000571043 SSTR3P32745 418 aaPredicted RBP18.34■□□□□ 0.53
RPAIN-208ENST00000571043 TNNT3P45378 269 aaPredicted RBP18.34■□□□□ 0.53
RPAIN-208ENST00000571043 RAP1GAPP47736 663 aa18.34■□□□□ 0.53
RPAIN-208ENST00000571043 TAP1Q03518 808 aa18.34■□□□□ 0.53
RPAIN-208ENST00000571043 INCA1Q0VD86 236 aa18.34■□□□□ 0.53
RPAIN-208ENST00000571043 MYO1EQ12965 1108 aa18.34■□□□□ 0.53
RPAIN-208ENST00000571043 ALKAL1Q6UXT8 129 aa18.34■□□□□ 0.53
RPAIN-208ENST00000571043 RTN4RL1Q86UN2 441 aaPredicted RBP18.34■□□□□ 0.53
RPAIN-208ENST00000571043 C7orf61Q8IZ16 206 aa18.34■□□□□ 0.53
RPAIN-208ENST00000571043 TMEM199Q8N511 208 aa18.34■□□□□ 0.53
RPAIN-208ENST00000571043 C1orf131Q8NDD1 294 aaKnown RBP18.34■□□□□ 0.53
RPAIN-208ENST00000571043 BEST2Q8NFU1 509 aa18.34■□□□□ 0.53
RPAIN-208ENST00000571043 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.34■□□□□ 0.53
RPAIN-208ENST00000571043 APBB2Q92870 758 aa18.34■□□□□ 0.53
RPAIN-208ENST00000571043 TMEM176AQ96HP8 235 aa18.34■□□□□ 0.53
RPAIN-208ENST00000571043 DDX47Q9H0S4 455 aaKnown RBP18.34■□□□□ 0.53
RPAIN-208ENST00000571043 CNTN3Q9P232 1028 aa18.34■□□□□ 0.53
RPAIN-208ENST00000571043 KIAA1257Q9ULG3 409 aa18.34■□□□□ 0.53
RPAIN-208ENST00000571043 TCRBV5S1A1TA0A578 114 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 PYGMP11217 842 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 CD19P15391 556 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 TTC3P53804 2025 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 CDH8P55286 799 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 CUL1Q13616 776 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 C2CD6Q53TS8 623 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 TWF2Q6IBS0 349 aaKnown RBP18.33■□□□□ 0.53
RPAIN-208ENST00000571043 ERICH1Q86X53 443 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 GSPT2Q8IYD1 628 aaKnown RBP18.33■□□□□ 0.53
RPAIN-208ENST00000571043 WDTC1Q8N5D0 677 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 LRRC52Q8N7C0 313 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 SLC4A11Q8NBS3 891 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 DPF3Q92784 378 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 ADAM2Q99965 735 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 TRIM7Q9C029 511 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 TRIM6Q9C030 488 aaPredicted RBP18.33■□□□□ 0.53
RPAIN-208ENST00000571043 ELOVL4Q9GZR5 314 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 RGS18Q9NS28 235 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 IP6K2Q9UHH9 426 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 STRIP2Q9ULQ0 834 aa18.33■□□□□ 0.53
RPAIN-208ENST00000571043 BARX2Q9UMQ3 279 aaPredicted RBP18.33■□□□□ 0.53
RPAIN-208ENST00000571043 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.33■□□□□ 0.53
RPAIN-208ENST00000571043 VDRP11473 427 aa18.33■□□□□ 0.52
RPAIN-208ENST00000571043 CSF2RAP15509 400 aa18.33■□□□□ 0.52
RPAIN-208ENST00000571043 GUCY2FP51841 1108 aa18.33■□□□□ 0.52
RPAIN-208ENST00000571043 LLGL2Q6P1M3 1020 aa18.33■□□□□ 0.52
RPAIN-208ENST00000571043 DENND1BQ6P3S1 775 aa18.33■□□□□ 0.52
RPAIN-208ENST00000571043 DEFB128Q7Z7B8 93 aa18.33■□□□□ 0.52
RPAIN-208ENST00000571043 PHLDB2Q86SQ0 1253 aa18.33■□□□□ 0.52
RPAIN-208ENST00000571043 CPNE8Q86YQ8 564 aa18.33■□□□□ 0.52
RPAIN-208ENST00000571043 SLC13A5Q86YT5 568 aaPredicted RBP18.33■□□□□ 0.52
RPAIN-208ENST00000571043 CASKIN2Q8WXE0 1202 aa18.33■□□□□ 0.52
RPAIN-208ENST00000571043 MTUS1Q9ULD2 1270 aa18.33■□□□□ 0.52
RPAIN-208ENST00000571043 MICAL3Q7RTP6 2002 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 A0A0U1RQF3 1178 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 FAM187AA6NFU0 413 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 TMEM191CA6NGB0 347 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 PSTPIP1O43586 416 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 ZNF623O75123 536 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 CHRNA3P32297 505 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 CARSP49589 748 aaKnown RBP18.32■□□□□ 0.52
RPAIN-208ENST00000571043 GSCP56915 257 aaPredicted RBP18.32■□□□□ 0.52
RPAIN-208ENST00000571043 DHX34Q14147 1143 aaKnown RBP18.32■□□□□ 0.52
RPAIN-208ENST00000571043 CNGA2Q16280 664 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 TCTN1Q2MV58 587 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 XKR4Q5GH76 650 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 DNAJC24Q6P3W2 148 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 SND1Q7KZF4 910 aaKnown RBP eCLIP18.32■□□□□ 0.52
RPAIN-208ENST00000571043 ZMAT2Q96NC0 199 aaKnown RBP18.32■□□□□ 0.52
RPAIN-208ENST00000571043 RUNDC3BQ96NL0 473 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 HINFPQ9BQA5 517 aa18.32■□□□□ 0.52
RPAIN-208ENST00000571043 TSPYL2Q9H2G4 693 aaPredicted RBP18.32■□□□□ 0.52
RPAIN-208ENST00000571043 FAM105AQ9NUU6 356 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms