RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 NXF1Q9UBU9 619 aaKnown RBP14.36□□□□□ -0.11
RPAIN-207ENST00000570883 GTF3C4Q9UKN8 822 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 PCDHB5Q9Y5E4 795 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 ZFP37Q9Y6Q3 630 aaPredicted RBP14.36□□□□□ -0.11
RPAIN-207ENST00000570883 NUMBLQ9Y6R0 609 aa14.36□□□□□ -0.11
RPAIN-207ENST00000570883 HELZP42694 1942 aaKnown RBP14.35□□□□□ -0.11
RPAIN-207ENST00000570883 TICRRQ7Z2Z1 1910 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 TMEM221A6NGB7 291 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 PRR33A8MZF0 331 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 PPP1R3GB7ZBB8 358 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 M0R296 226 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 CETN3O15182 167 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 TACC1O75410 805 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 ASS1P00966 412 aaKnown RBP14.35□□□□□ -0.11
RPAIN-207ENST00000570883 HLA-DRAP01903 254 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 MYL4P12829 197 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 KRT13P13646 458 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 GJA1P17302 382 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 CCNE1P24864 410 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 RAP1GAPP47736 663 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 GCLMP48507 274 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 GPR15P49685 360 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 LRRC63Q05C16 580 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 TDGQ13569 410 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 CAMK4Q16566 473 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 NFE2Q16621 373 aaPredicted RBP14.35□□□□□ -0.11
RPAIN-207ENST00000570883 SPOPLQ6IQ16 392 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 FAM171BQ6P995 826 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 SCARA5Q6ZMJ2 495 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 HFE2Q6ZVN8 426 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 PDZD4Q76G19 769 aaPredicted RBP14.35□□□□□ -0.11
RPAIN-207ENST00000570883 STKLD1Q8NE28 680 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 SHKBP1Q8TBC3 707 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 GPR152Q8TDT2 470 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 TAS1R2Q8TE23 839 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 PSMG2Q969U7 264 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 PI4K2AQ9BTU6 479 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 SDCBP2Q9H190 292 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 DPEP3Q9H4B8 488 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 ABCB6Q9NP58 842 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 CDH9Q9ULB4 789 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 DUSP12Q9UNI6 340 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 COL4A3Q01955 1670 aa14.35□□□□□ -0.11
RPAIN-207ENST00000570883 MYO16Q9Y6X6 1858 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 PSMA7O14818 248 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 SLC16A3O15427 465 aaKnown RBP14.34□□□□□ -0.11
RPAIN-207ENST00000570883 LRRN2O75325 713 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 MICAL2O94851 1124 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 PDGFRBP09619 1106 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 FCARP24071 287 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 CYP2F1P24903 491 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 PIK3CAP42336 1068 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 TUFMP49411 452 aaKnown RBP14.34□□□□□ -0.11
RPAIN-207ENST00000570883 CDH8P55286 799 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 ZNF667Q5HYK9 610 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 CYP4A22Q5TCH4 519 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 SDHAF4Q5VUM1 108 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 KLHL10Q6JEL2 608 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 TTI2Q6NXR4 508 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 GAREM2Q75VX8 874 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 DNAJB7Q7Z6W7 309 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-207ENST00000570883 SLC44A3Q8N4M1 653 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 LEMD2Q8NC56 503 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 GIPC2Q8TF65 315 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 NXPE3Q969Y0 559 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 MYLPFQ96A32 169 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 MCRS1Q96EZ8 462 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 DHTKD1Q96HY7 919 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-207ENST00000570883 ZSWIM3Q96MP5 696 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 TSG101Q99816 390 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 DUSP9Q99956 384 aaKnown RBP14.34□□□□□ -0.11
RPAIN-207ENST00000570883 KXD1Q9BQD3 176 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 SNX25Q9H3E2 840 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 MMRN2Q9H8L6 949 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 IL21Q9HBE4 155 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.34□□□□□ -0.115e-6■■■■□ 23.1
RPAIN-207ENST00000570883 GDE1Q9NZC3 331 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 ASB3Q9Y575 518 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 MIA3Q5JRA6 1907 aa14.34□□□□□ -0.11
RPAIN-207ENST00000570883 A0A1W2PRU2 124 aa14.33□□□□□ -0.12
RPAIN-207ENST00000570883 ZNF197O14709 1029 aa14.33□□□□□ -0.12
RPAIN-207ENST00000570883 PDGFBP01127 241 aaPredicted RBP14.33□□□□□ -0.12
RPAIN-207ENST00000570883 FAM163BP0C2L3 166 aa14.33□□□□□ -0.12
RPAIN-207ENST00000570883 EPB41P11171 864 aaKnown RBP14.33□□□□□ -0.12
RPAIN-207ENST00000570883 HMGA1P17096 107 aaKnown RBP14.33□□□□□ -0.12
RPAIN-207ENST00000570883 GNL1P36915 607 aaPredicted RBP14.33□□□□□ -0.12
RPAIN-207ENST00000570883 ASPAP45381 313 aa14.33□□□□□ -0.12
RPAIN-207ENST00000570883 FKBP3Q00688 224 aaKnown RBP14.33□□□□□ -0.12
RPAIN-207ENST00000570883 STIM1Q13586 685 aa14.33□□□□□ -0.12
RPAIN-207ENST00000570883 TEAD2Q15562 447 aa14.33□□□□□ -0.12
RPAIN-207ENST00000570883 CFAP221Q4G0U5 840 aa14.33□□□□□ -0.12
RPAIN-207ENST00000570883 STXBP5Q5T5C0 1151 aa14.33□□□□□ -0.12
RPAIN-207ENST00000570883 OR6B3Q8NGW1 331 aa14.33□□□□□ -0.12
RPAIN-207ENST00000570883 NELFBQ8WX92 580 aa14.33□□□□□ -0.12
RPAIN-207ENST00000570883 IPO9Q96P70 1041 aaKnown RBP14.33□□□□□ -0.12
RPAIN-207ENST00000570883 APOBEC3GQ9HC16 384 aaKnown RBP14.33□□□□□ -0.12
RPAIN-207ENST00000570883 TMEM8AQ9HCN3 771 aa14.33□□□□□ -0.12
RPAIN-207ENST00000570883 LMBRD1Q9NUN5 540 aa14.33□□□□□ -0.12
RPAIN-207ENST00000570883 RAPGEFL1Q9UHV5 662 aa14.33□□□□□ -0.12
RPAIN-207ENST00000570883 CTNND2Q9UQB3 1225 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms