RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 NRG3P56975 720 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 HMGN5P82970 282 aaKnown RBP7.98□□□□□ -1.13
CNOT1-222ENST00000570139 CYP4F8P98187 520 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 ICA1Q05084 483 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 MGAT2Q10469 447 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 FOXD4Q12950 439 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-222ENST00000570139 FGL2Q14314 439 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 NR0B2Q15466 257 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 C12orf60Q5U649 245 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 CCDC174Q6PII3 467 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 CPLX2Q6PUV4 134 aaKnown RBP7.98□□□□□ -1.13
CNOT1-222ENST00000570139 SYNE3Q6ZMZ3 975 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 GLB1L2Q8IW92 636 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 DRC7Q8IY82 874 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 CERS5Q8N5B7 392 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 SH3RF3Q8TEJ3 882 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-222ENST00000570139 ARL8AQ96BM9 186 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 CCDC120Q96HB5 630 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 FAM167AQ96KS9 214 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 TBATAQ96M53 351 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 ALPK1Q96QP1 1244 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 UBAC1Q9BSL1 405 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 PITHD1Q9GZP4 211 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-222ENST00000570139 DHX36Q9H2U1 1008 aaKnown RBP7.98□□□□□ -1.13
CNOT1-222ENST00000570139 ADAMTS10Q9H324 1103 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 PNPLA8Q9NP80 782 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 UCKL1Q9NWZ5 548 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 MCM9Q9NXL9 1143 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 TMOD2Q9NZR1 351 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 SLAMF8Q9P0V8 285 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-222ENST00000570139 EBF1Q9UH73 591 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 SMC3Q9UQE7 1217 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 NEDD4P46934 1319 aa7.98□□□□□ -1.13
CNOT1-222ENST00000570139 ADAMTSL1Q8N6G6 1762 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 CCDC196A0A1B0GTZ2 297 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 FITM1A5D6W6 292 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 DDX3XO00571 662 aaKnown RBP eCLIP7.97□□□□□ -1.13
CNOT1-222ENST00000570139 SH2B2O14492 632 aaPredicted RBP7.97□□□□□ -1.13
CNOT1-222ENST00000570139 OPHN1O60890 802 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 CALM1P0DP23 149 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 CALM2P0DP24 149 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 CALM3P0DP25 149 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 CPA1P15085 419 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 FOSL1P15407 271 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 STT3AP46977 705 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 BLMHQ13867 455 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 WTAPQ15007 396 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 ME3Q16798 604 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 TUBB8Q3ZCM7 444 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 FAM209BQ5JX69 171 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 FKBP1CQ5VVH2 108 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 CIAPIN1Q6FI81 312 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 GLB1L3Q8NCI6 653 aaPredicted RBP7.97□□□□□ -1.13
CNOT1-222ENST00000570139 ARRDC4Q8NCT1 418 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 PDZD8Q8NEN9 1154 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 KIAA1191Q96A73 305 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 HIST1H2AHQ96KK5 128 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 HIST1H2AJQ99878 128 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 C7orf25Q9BPX7 421 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 IDI2Q9BXS1 227 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 UNKQ9C0B0 810 aaKnown RBP7.97□□□□□ -1.13
CNOT1-222ENST00000570139 KIAA1586Q9HCI6 787 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 RBM12Q9NTZ6 932 aaKnown RBP7.97□□□□□ -1.13
CNOT1-222ENST00000570139 EVLQ9UI08 416 aaPredicted RBP7.97□□□□□ -1.13
CNOT1-222ENST00000570139 SCOCQ9UIL1 159 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.97□□□□□ -1.13
CNOT1-222ENST00000570139 SCINQ9Y6U3 715 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 WDR33Q9C0J8 1336 aaKnown RBP7.97□□□□□ -1.13
CNOT1-222ENST00000570139 PLIN4Q96Q06 1357 aa7.97□□□□□ -1.13
CNOT1-222ENST00000570139 COL4A5P29400 1685 aa7.96□□□□□ -1.13
CNOT1-222ENST00000570139 CCDC69A6NI79 296 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 LRRC10BA6NIK2 292 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 YDJCA8MPS7 323 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 IFIT3O14879 490 aaKnown RBP7.96□□□□□ -1.14
CNOT1-222ENST00000570139 SGTAO43765 313 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 ENTPD3O75355 529 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 ARIH2O95376 493 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 CELA3BP08861 270 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 CASP2P42575 452 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 TECP42680 631 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 ANTXR2P58335 489 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 IL10RAQ13651 578 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 RAB3GAP1Q15042 981 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 APOBEC3HQ6NTF7 200 aaKnown RBP7.96□□□□□ -1.14
CNOT1-222ENST00000570139 PGBD2Q6P3X8 592 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 BRI3BPQ8WY22 251 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 KAT5Q92993 513 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 OSBPL5Q9H0X9 879 aaPredicted RBP7.96□□□□□ -1.14
CNOT1-222ENST00000570139 INCENPQ9NQS7 918 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 USP40Q9NVE5 1235 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 FTSJ1Q9UET6 329 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 CDC23Q9UJX2 597 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 SYNPO2Q9UMS6 1093 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 SIT1Q9Y3P8 196 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 ATP6V1DQ9Y5K8 247 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 ATRNL1Q5VV63 1379 aa7.96□□□□□ -1.14
CNOT1-222ENST00000570139 A0A087WV62 115 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 KLF18A0A0U1RQI7 1052 aa7.95□□□□□ -1.14
CNOT1-222ENST00000570139 A0A1W2PPL8 197 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms