RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 ENOSF1Q7L5Y1 443 aa12.98□□□□□ -0.33
SF3B3-208ENST00000567250 SPATA2LQ8IUW3 424 aaPredicted RBP12.98□□□□□ -0.33
SF3B3-208ENST00000567250 ELMOD1Q8N336 334 aa12.98□□□□□ -0.33
SF3B3-208ENST00000567250 SMRP1Q8NCR6 262 aa12.98□□□□□ -0.33
SF3B3-208ENST00000567250 EHBP1Q8NDI1 1231 aa12.98□□□□□ -0.33
SF3B3-208ENST00000567250 ATXN2LQ8WWM7 1075 aaKnown RBP12.98□□□□□ -0.33
SF3B3-208ENST00000567250 RIPOR3Q96MK2 946 aa12.98□□□□□ -0.33
SF3B3-208ENST00000567250 NECTIN4Q96NY8 510 aa12.98□□□□□ -0.33
SF3B3-208ENST00000567250 PGLYRP2Q96PD5 576 aa12.98□□□□□ -0.33
SF3B3-208ENST00000567250 ANP32EQ9BTT0 268 aa12.98□□□□□ -0.33
SF3B3-208ENST00000567250 NT5C1AQ9BXI3 368 aa12.98□□□□□ -0.33
SF3B3-208ENST00000567250 RHOBTB2Q9BYZ6 727 aa12.98□□□□□ -0.33
SF3B3-208ENST00000567250 CBX8Q9HC52 389 aa12.98□□□□□ -0.33
SF3B3-208ENST00000567250 ABI2Q9NYB9 513 aaPredicted RBP12.98□□□□□ -0.33
SF3B3-208ENST00000567250 LIMA1Q9UHB6 759 aaKnown RBP12.98□□□□□ -0.33
SF3B3-208ENST00000567250 CILPO75339 1184 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 PDGFRBP09619 1106 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 WEE2P0C1S8 567 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 SPATA31D3P0C874 917 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 MTHFRP42898 656 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 ALDH1A3P47895 512 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 TUFMP49411 452 aaKnown RBP12.97□□□□□ -0.33
SF3B3-208ENST00000567250 NDST1P52848 882 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 COPB1P53618 953 aaKnown RBP12.97□□□□□ -0.33
SF3B3-208ENST00000567250 CDH8P55286 799 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 ZNF445P59923 1031 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 DLX2Q07687 328 aaPredicted RBP12.97□□□□□ -0.33
SF3B3-208ENST00000567250 LRMPQ12912 555 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 VEPH1Q14D04 833 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 IQCB1Q15051 598 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 MGAT5BQ3V5L5 792 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 CFAP221Q4G0U5 840 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 FILIP1LQ4L180 1135 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 RARS2Q5T160 578 aaKnown RBP12.97□□□□□ -0.33
SF3B3-208ENST00000567250 SMYD5Q6GMV2 418 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 SYCE2Q6PIF2 218 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 SPATA31D4Q6ZUB0 917 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 B3GALNT2Q8NCR0 500 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 LMO3Q8TAP4 145 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 MYCBPAPQ8TBZ2 947 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 JAKMIP2Q96AA8 810 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 TMEM209Q96SK2 561 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 ELOVL4Q9GZR5 314 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 SDCBP2Q9H190 292 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 VPS16Q9H269 839 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 ADAM7Q9H2U9 754 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 PIDD1Q9HB75 910 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 CISHQ9NSE2 258 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 APEX2Q9UBZ4 518 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 GTF3C4Q9UKN8 822 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 DAAM1Q9Y4D1 1078 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 YIPF1Q9Y548 306 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 XIRP2A4UGR9 3374 aa12.97□□□□□ -0.33
SF3B3-208ENST00000567250 CCDC195A0A1B0GUA6 201 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 LGALS16A8MUM7 142 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 LRRN2O75325 713 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 PAPLNO95428 1278 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 PTPN1P18031 435 aaKnown RBP12.96□□□□□ -0.33
SF3B3-208ENST00000567250 LMO2P25791 158 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 MFAP3P55082 362 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 RPL10AP62906 217 aaKnown RBP12.96□□□□□ -0.33
SF3B3-208ENST00000567250 MRPS5P82675 430 aaKnown RBP12.96□□□□□ -0.33
SF3B3-208ENST00000567250 CYP27A1Q02318 531 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 CLUL1Q15846 466 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 MDH1BQ5I0G3 518 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 ATAT1Q5SQI0 421 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 IQCEQ6IPM2 695 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 FAM171BQ6P995 826 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 GPR149Q86SP6 731 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 LUZP1Q86V48 1076 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 SMG7Q92540 1137 aaKnown RBP12.96□□□□□ -0.33
SF3B3-208ENST00000567250 MYLPFQ96A32 169 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 ELMO3Q96BJ8 720 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 PKMYT1Q99640 499 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 SEPT5Q99719 369 aaPredicted RBP12.96□□□□□ -0.33
SF3B3-208ENST00000567250 ARID3AQ99856 593 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 CRACR2AQ9BSW2 395 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 PRKD2Q9BZL6 878 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 CRTAC1Q9NQ79 661 aa12.96□□□□□ -0.33
SF3B3-208ENST00000567250 MYO16Q9Y6X6 1858 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 TRIM66O15016 1216 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 MBTPS2O43462 519 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 RFPL2O75678 378 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 SERPINC1P01008 464 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 HAPLN1P10915 354 aaPredicted RBP12.95□□□□□ -0.34
SF3B3-208ENST00000567250 ANXA13P27216 316 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 MAGEA11P43364 429 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 EPHB3P54753 998 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 TWF1Q12792 350 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 DUSP4Q13115 394 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 CBX2Q14781 532 aaPredicted RBP12.95□□□□□ -0.34
SF3B3-208ENST00000567250 PTCRAQ6ISU1 281 aaPredicted RBP12.95□□□□□ -0.34
SF3B3-208ENST00000567250 VSTM1Q6UX27 236 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 TMC5Q6UXY8 1006 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 ITIH5Q86UX2 942 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 LRRTM3Q86VH5 581 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 CRYBG2Q8N1P7 616 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 ATAD1Q8NBU5 361 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 LEMD2Q8NC56 503 aa12.95□□□□□ -0.34
SF3B3-208ENST00000567250 TATDN2Q93075 761 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms