RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 ARFGAP2Q8N6H7 521 aa24.6■■□□□ 1.53
LINC00543-201ENST00000567234 SLC4A11Q8NBS3 891 aa24.6■■□□□ 1.53
LINC00543-201ENST00000567234 TSEN2Q8NCE0 465 aaKnown RBP24.6■■□□□ 1.53
LINC00543-201ENST00000567234 LENG1Q96BZ8 264 aaPredicted RBP24.6■■□□□ 1.53
LINC00543-201ENST00000567234 SMYD3Q9H7B4 428 aa24.6■■□□□ 1.53
LINC00543-201ENST00000567234 AKR1A1P14550 325 aa24.59■■□□□ 1.53
LINC00543-201ENST00000567234 CD19P15391 556 aa24.59■■□□□ 1.53
LINC00543-201ENST00000567234 PTGIRP43119 386 aa24.59■■□□□ 1.53
LINC00543-201ENST00000567234 PTPN11Q06124 597 aaPredicted RBP24.59■■□□□ 1.53
LINC00543-201ENST00000567234 TMEM62Q0P6H9 643 aa24.59■■□□□ 1.53
LINC00543-201ENST00000567234 DNAJC24Q6P3W2 148 aa24.59■■□□□ 1.53
LINC00543-201ENST00000567234 KATNAL2Q8IYT4 538 aa24.59■■□□□ 1.53
LINC00543-201ENST00000567234 ZDHHC14Q8IZN3 488 aa24.59■■□□□ 1.53
LINC00543-201ENST00000567234 CD99L2Q8TCZ2 262 aa24.59■■□□□ 1.53
LINC00543-201ENST00000567234 TMEM176AQ96HP8 235 aa24.59■■□□□ 1.53
LINC00543-201ENST00000567234 SNX27Q96L92 541 aa24.59■■□□□ 1.53
LINC00543-201ENST00000567234 TSPAN18Q96SJ8 248 aa24.59■■□□□ 1.53
LINC00543-201ENST00000567234 OSMRQ99650 979 aa24.59■■□□□ 1.53
LINC00543-201ENST00000567234 LRRC19Q9H756 370 aa24.59■■□□□ 1.53
LINC00543-201ENST00000567234 CDHR5Q9HBB8 845 aa24.59■■□□□ 1.53
LINC00543-201ENST00000567234 GBP1P32455 592 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 YARSP54577 528 aaKnown RBP24.58■■□□□ 1.53
LINC00543-201ENST00000567234 CDH8P55286 799 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 MYO1EQ12965 1108 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 FSCN1Q16658 493 aaKnown RBP24.58■■□□□ 1.53
LINC00543-201ENST00000567234 PPP1R15BQ5SWA1 713 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 WLSQ5T9L3 541 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 FBXW10Q5XX13 1052 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 JAMLQ86YT9 394 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 LRRC45Q96CN5 670 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 KIAA1257Q9ULG3 409 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 BARX2Q9UMQ3 279 aaPredicted RBP24.58■■□□□ 1.53
LINC00543-201ENST00000567234 GINS2Q9Y248 185 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 DAPK3O43293 454 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 DUSP11O75319 330 aaKnown RBP24.58■■□□□ 1.53
LINC00543-201ENST00000567234 RARAP10276 462 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 VDRP11473 427 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 ACTN3Q08043 901 aaPredicted RBP24.58■■□□□ 1.53
LINC00543-201ENST00000567234 HIC1Q14526 733 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 ZBTB6Q15916 424 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 DENND1BQ6P3S1 775 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 IQCKQ8N0W5 287 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 GIMAP7Q8NHV1 300 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 DNAJB3Q8WWF6 145 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 TRIB2Q92519 343 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 ELOVL4Q9GZR5 314 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 WDR35Q9P2L0 1181 aa24.58■■□□□ 1.53
LINC00543-201ENST00000567234 GOLGA6L7A0A1B0GV03 622 aa24.57■■□□□ 1.52
LINC00543-201ENST00000567234 C17orf102A2RUQ5 167 aa24.57■■□□□ 1.52
LINC00543-201ENST00000567234 HMGB1P1B2RPK0 211 aaPredicted RBP24.57■■□□□ 1.52
LINC00543-201ENST00000567234 COILP38432 576 aaPredicted RBP24.57■■□□□ 1.52
LINC00543-201ENST00000567234 GUCY2FP51841 1108 aa24.57■■□□□ 1.52
LINC00543-201ENST00000567234 PIGHQ14442 188 aaPredicted RBP24.57■■□□□ 1.52
LINC00543-201ENST00000567234 SNX17Q15036 470 aa24.57■■□□□ 1.52
LINC00543-201ENST00000567234 LRRC38Q5VT99 294 aa24.57■■□□□ 1.52
LINC00543-201ENST00000567234 CCDC137Q6PK04 289 aaKnown RBP24.57■■□□□ 1.52
LINC00543-201ENST00000567234 DDX42Q86XP3 938 aaKnown RBP eCLIP24.57■■□□□ 1.52
LINC00543-201ENST00000567234 NIPA2Q8N8Q9 360 aa24.57■■□□□ 1.52
LINC00543-201ENST00000567234 SLCO2A1Q92959 643 aa24.57■■□□□ 1.52
LINC00543-201ENST00000567234 C18orf8Q96DM3 657 aa24.57■■□□□ 1.52
LINC00543-201ENST00000567234 SNTG2Q9NY99 539 aa24.57■■□□□ 1.52
LINC00543-201ENST00000567234 HTTP42858 3142 aa24.57■■□□□ 1.52
LINC00543-201ENST00000567234 CEP350Q5VT06 3117 aa24.57■■□□□ 1.52
LINC00543-201ENST00000567234 TREHO43280 583 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 HMGCRP04035 888 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 CRYBB1P53674 252 aaPredicted RBP24.56■■□□□ 1.52
LINC00543-201ENST00000567234 PURAQ00577 322 aaKnown RBP24.56■■□□□ 1.52
LINC00543-201ENST00000567234 BEX3Q00994 111 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 CNGA2Q16280 664 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 ALKAL1Q6UXT8 129 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 EXD1Q8NHP7 514 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 CNTN3Q9P232 1028 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 SCN1AP35498 2009 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 CASP8AP2Q9UKL3 1982 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 RPL7AP62424 266 aaKnown RBP24.56■■□□□ 1.52
LINC00543-201ENST00000567234 CFAP58Q5T655 872 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 DCUN1D2Q6PH85 259 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 LRRC52Q8N7C0 313 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 BEST2Q8NFU1 509 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 TRIM51Q9BSJ1 452 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 EIF2AQ9BY44 585 aaKnown RBP24.56■■□□□ 1.52
LINC00543-201ENST00000567234 HOMER3Q9NSC5 361 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 MCM8Q9UJA3 840 aa24.56■■□□□ 1.52
LINC00543-201ENST00000567234 TCRBV7S2A1N4TA0A589 114 aa24.55■■□□□ 1.52
LINC00543-201ENST00000567234 RASSF9O75901 435 aa24.55■■□□□ 1.52
LINC00543-201ENST00000567234 LSP1P33241 339 aa24.55■■□□□ 1.52
LINC00543-201ENST00000567234 TAS2R40P59535 323 aa24.55■■□□□ 1.52
LINC00543-201ENST00000567234 IFFO1Q0D2I5 559 aa24.55■■□□□ 1.52
LINC00543-201ENST00000567234 TRIM32Q13049 653 aa24.55■■□□□ 1.52
LINC00543-201ENST00000567234 TWNKQ96RR1 684 aa24.55■■□□□ 1.52
LINC00543-201ENST00000567234 TRIM6Q9C030 488 aaPredicted RBP24.55■■□□□ 1.52
LINC00543-201ENST00000567234 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.55■■□□□ 1.52
LINC00543-201ENST00000567234 CETN2P41208 172 aa24.54■■□□□ 1.52
LINC00543-201ENST00000567234 STILQ15468 1287 aa24.54■■□□□ 1.52
LINC00543-201ENST00000567234 PTPN20Q4JDL3 420 aa24.54■■□□□ 1.52
LINC00543-201ENST00000567234 TTMPQ5BVD1 217 aa24.54■■□□□ 1.52
LINC00543-201ENST00000567234 TTC27Q6P3X3 843 aa24.54■■□□□ 1.52
LINC00543-201ENST00000567234 C7orf31Q8N865 590 aa24.54■■□□□ 1.52
LINC00543-201ENST00000567234 TRPV1Q8NER1 839 aa24.54■■□□□ 1.52
LINC00543-201ENST00000567234 MCEEQ96PE7 176 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms