RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 CCDC142Q17RM4 750 aa16.72■□□□□ 0.27
PALB2-205ENST00000567003 PLK5Q496M5 336 aa16.72■□□□□ 0.27
PALB2-205ENST00000567003 ZC2HC1CQ53FD0 456 aaPredicted RBP16.72■□□□□ 0.27
PALB2-205ENST00000567003 EFCAB13Q8IY85 973 aa16.72■□□□□ 0.27
PALB2-205ENST00000567003 EZH1Q92800 747 aaPredicted RBP16.72■□□□□ 0.27
PALB2-205ENST00000567003 FAM84AQ96KN4 292 aa16.72■□□□□ 0.27
PALB2-205ENST00000567003 FIZ1Q96SL8 496 aa16.72■□□□□ 0.27
PALB2-205ENST00000567003 PI4K2AQ9BTU6 479 aa16.72■□□□□ 0.27
PALB2-205ENST00000567003 DUSP15Q9H1R2 295 aaPredicted RBP16.72■□□□□ 0.27
PALB2-205ENST00000567003 PARVGQ9HBI0 331 aa16.72■□□□□ 0.27
PALB2-205ENST00000567003 SH2B1Q9NRF2 756 aaPredicted RBP16.72■□□□□ 0.27
PALB2-205ENST00000567003 DPP3Q9NY33 737 aa16.72■□□□□ 0.27
PALB2-205ENST00000567003 DSEQ9UL01 958 aa16.72■□□□□ 0.27
PALB2-205ENST00000567003 ODF2LQ9ULJ1 636 aa16.72■□□□□ 0.27
PALB2-205ENST00000567003 INVSQ9Y283 1065 aa16.72■□□□□ 0.27
PALB2-205ENST00000567003 ABCA7Q8IZY2 2146 aa16.72■□□□□ 0.27
PALB2-205ENST00000567003 CCDC163A0A0D9SF12 145 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 TULP1O00294 542 aaPredicted RBP16.71■□□□□ 0.27
PALB2-205ENST00000567003 GIPC1O14908 333 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 ATG13O75143 517 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 TAF6P49848 677 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 ZNF131P52739 623 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 PTPAQ15257 358 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 RNF43Q68DV7 783 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 SCARA3Q6AZY7 606 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 PSAPL1Q6NUJ1 521 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 CD302Q8IX05 232 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 THEM5Q8N1Q8 247 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 RPLP0P6Q8NHW5 317 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 SPPL2BQ8TCT7 592 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 KCNN1Q92952 543 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 TSPAN18Q96SJ8 248 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 KIF2CQ99661 725 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 BLOC1S4Q9NUP1 217 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 TDP1Q9NUW8 608 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 DERAQ9Y315 318 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 SPEGQ15772 3267 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 FAM208BQ5VWN6 2430 aa16.71■□□□□ 0.27
PALB2-205ENST00000567003 ZFYVE26Q68DK2 2539 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 ANTXRLA6NF34 631 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 TRAK2O60296 914 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 PRPF40AO75400 957 aaKnown RBP16.7■□□□□ 0.26
PALB2-205ENST00000567003 KRT18P05783 430 aaKnown RBP16.7■□□□□ 0.26
PALB2-205ENST00000567003 GJA4P35212 333 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 WNT7BP56706 349 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 SHC2P98077 582 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 RILPL1Q5EBL4 403 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 ADALQ6DHV7 355 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 C2orf15Q8WU43 125 aaKnown RBP16.7■□□□□ 0.26
PALB2-205ENST00000567003 ZC3H10Q96K80 434 aaKnown RBP16.7■□□□□ 0.26
PALB2-205ENST00000567003 SLC22A12Q96S37 553 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 P2RY13Q9BPV8 354 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 EDEM2Q9BV94 578 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 LSM14BQ9BX40 385 aaKnown RBP16.7■□□□□ 0.26
PALB2-205ENST00000567003 TRPC7Q9HCX4 862 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 VPS45Q9NRW7 570 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 C2CD2Q9Y426 696 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 PCDHB5Q9Y5E4 795 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 PCDHGA5Q9Y5G8 931 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 WNT6Q9Y6F9 365 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 WDFY3Q8IZQ1 3526 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 AKAP13Q12802 2813 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 NUP205Q92621 2012 aa16.7■□□□□ 0.26
PALB2-205ENST00000567003 AKAP3O75969 853 aa16.69■□□□□ 0.26
PALB2-205ENST00000567003 PLCG1P19174 1290 aa16.69■□□□□ 0.26
PALB2-205ENST00000567003 ACAT1P24752 427 aaKnown RBP16.69■□□□□ 0.26
PALB2-205ENST00000567003 GTF2BQ00403 316 aa16.69■□□□□ 0.26
PALB2-205ENST00000567003 CREB5Q02930 508 aa16.69■□□□□ 0.26
PALB2-205ENST00000567003 GRIN1Q05586 938 aa16.69■□□□□ 0.26
PALB2-205ENST00000567003 PSMD2Q13200 908 aa16.69■□□□□ 0.26
PALB2-205ENST00000567003 MTF1Q14872 753 aa16.69■□□□□ 0.26
PALB2-205ENST00000567003 KARSQ15046 597 aaKnown RBP16.69■□□□□ 0.26
PALB2-205ENST00000567003 DDR2Q16832 855 aa16.69■□□□□ 0.26
PALB2-205ENST00000567003 CC2D1AQ6P1N0 951 aaPredicted RBP16.69■□□□□ 0.26
PALB2-205ENST00000567003 MON1AQ86VX9 555 aa16.69■□□□□ 0.26
PALB2-205ENST00000567003 ZSWIM2Q8NEG5 633 aa16.69■□□□□ 0.26
PALB2-205ENST00000567003 MRPS31Q92665 395 aaKnown RBP16.69■□□□□ 0.26
PALB2-205ENST00000567003 ASB7Q9H672 318 aa16.69■□□□□ 0.26
PALB2-205ENST00000567003 KIF9Q9HAQ2 790 aa16.69■□□□□ 0.26
PALB2-205ENST00000567003 AGO2Q9UKV8 859 aaKnown RBP16.69■□□□□ 0.26
PALB2-205ENST00000567003 ANAPC1Q9H1A4 1944 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 C4orf47A7E2U8 309 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 KPNA7A9QM74 516 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 HCRTO43612 131 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 TBCAO75347 108 aaKnown RBP16.68■□□□□ 0.26
PALB2-205ENST00000567003 SPINK2P20155 84 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 DRD1P21728 446 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 PAX3P23760 479 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 CYP2F1P24903 491 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 DDX6P26196 483 aaKnown RBP eCLIP16.68■□□□□ 0.26
PALB2-205ENST00000567003 DMC1Q14565 340 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 CRELD2Q6UXH1 353 aaPredicted RBP16.68■□□□□ 0.26
PALB2-205ENST00000567003 OSTM1Q86WC4 334 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 DCP1BQ8IZD4 617 aaKnown RBP16.68■□□□□ 0.26
PALB2-205ENST00000567003 CAMKK1Q8N5S9 505 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 KCTD17Q8N5Z5 321 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 RAD54LQ92698 747 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 CALML4Q96GE6 196 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 CYP2S1Q96SQ9 504 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 ECT2Q9H8V3 914 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms