RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 CDC42EP1Q00587 391 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 TAP1Q03518 808 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 PPP1R7Q15435 360 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 ZBTB6Q15916 424 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 LRIG3Q6UXM1 1119 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 EMC1Q8N766 993 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 MAIP1Q8WWC4 291 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 SLITRK1Q96PX8 696 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 ZIC5Q96T25 663 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 LRRC4CQ9HCJ2 640 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 METTL5Q9NRN9 209 aaKnown RBP20.2■□□□□ 0.82
SMPD3-203ENST00000563226 PIN4Q9Y237 131 aaKnown RBP20.2■□□□□ 0.82
SMPD3-203ENST00000563226 NME7Q9Y5B8 376 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 FAM155AB1AL88 458 aaPredicted RBP20.19■□□□□ 0.82
SMPD3-203ENST00000563226 KRT1P04264 644 aa20.19■□□□□ 0.82
SMPD3-203ENST00000563226 VDRP11473 427 aa20.19■□□□□ 0.82
SMPD3-203ENST00000563226 KRT3P12035 628 aa20.19■□□□□ 0.82
SMPD3-203ENST00000563226 GPD2P43304 727 aa20.19■□□□□ 0.82
SMPD3-203ENST00000563226 ZNF844Q08AG5 666 aa20.19■□□□□ 0.82
SMPD3-203ENST00000563226 NFX1Q12986 1120 aaKnown RBP20.19■□□□□ 0.82
SMPD3-203ENST00000563226 PDCLQ13371 301 aa20.19■□□□□ 0.82
SMPD3-203ENST00000563226 FSCN1Q16658 493 aaKnown RBP20.19■□□□□ 0.82
SMPD3-203ENST00000563226 MFSD7Q6UXD7 560 aa20.19■□□□□ 0.82
SMPD3-203ENST00000563226 ALKAL1Q6UXT8 129 aa20.19■□□□□ 0.82
SMPD3-203ENST00000563226 NIPA2Q8N8Q9 360 aa20.19■□□□□ 0.82
SMPD3-203ENST00000563226 C12orf29Q8N999 325 aa20.19■□□□□ 0.82
SMPD3-203ENST00000563226 SOCS4Q8WXH5 440 aa20.19■□□□□ 0.82
SMPD3-203ENST00000563226 MRPL45Q9BRJ2 306 aaKnown RBP20.19■□□□□ 0.82
SMPD3-203ENST00000563226 EPB41L4BQ9H329 900 aa20.19■□□□□ 0.82
SMPD3-203ENST00000563226 ZFYVE28Q9HCC9 887 aa20.19■□□□□ 0.82
SMPD3-203ENST00000563226 SIGLEC16A6NMB1 481 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 PURAQ00577 322 aaKnown RBP20.18■□□□□ 0.82
SMPD3-203ENST00000563226 MTMR3Q13615 1198 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 PIGHQ14442 188 aaPredicted RBP20.18■□□□□ 0.82
SMPD3-203ENST00000563226 CNGA2Q16280 664 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 DNAJC21Q5F1R6 531 aaKnown RBP20.18■□□□□ 0.82
SMPD3-203ENST00000563226 UBAP2Q5T6F2 1119 aaKnown RBP20.18■□□□□ 0.82
SMPD3-203ENST00000563226 ARFGAP1Q8N6T3 406 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 TRIM6Q9C030 488 aaPredicted RBP20.18■□□□□ 0.82
SMPD3-203ENST00000563226 SYNCQ9H7C4 482 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 KLK14Q9P0G3 267 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 DERAQ9Y315 318 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 SNX9Q9Y5X1 595 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 C17orf102A2RUQ5 167 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 TP73O15350 636 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 CAPN2P17655 700 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 PSMA2P25787 234 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 YARSP54577 528 aaKnown RBP20.18■□□□□ 0.82
SMPD3-203ENST00000563226 TRIP13Q15645 432 aaPredicted RBP20.18■□□□□ 0.82
SMPD3-203ENST00000563226 UBXN11Q5T124 520 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 ZFYVE27Q5T4F4 411 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 KAZNQ674X7 775 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 APBB1IPQ7Z5R6 666 aaPredicted RBP20.18■□□□□ 0.82
SMPD3-203ENST00000563226 RAPGEF5Q92565 580 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 RNF39Q9H2S5 420 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 CNTN3Q9P232 1028 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 Q9Y3F1 56 aa20.18■□□□□ 0.82
SMPD3-203ENST00000563226 PIK3R2O00459 728 aa20.17■□□□□ 0.82
SMPD3-203ENST00000563226 HMGCRP04035 888 aa20.17■□□□□ 0.82
SMPD3-203ENST00000563226 MYO1EQ12965 1108 aa20.17■□□□□ 0.82
SMPD3-203ENST00000563226 LRRC38Q5VT99 294 aa20.17■□□□□ 0.82
SMPD3-203ENST00000563226 RCOR2Q8IZ40 523 aa20.17■□□□□ 0.82
SMPD3-203ENST00000563226 ART4Q93070 314 aa20.17■□□□□ 0.82
SMPD3-203ENST00000563226 CCDC114Q96M63 670 aa20.17■□□□□ 0.82
SMPD3-203ENST00000563226 NT5C1AQ9BXI3 368 aa20.17■□□□□ 0.82
SMPD3-203ENST00000563226 ARHGAP39Q9C0H5 1083 aa20.17■□□□□ 0.82
SMPD3-203ENST00000563226 TMBIM4Q9HC24 238 aa20.17■□□□□ 0.82
SMPD3-203ENST00000563226 TSPAN16Q9UKR8 245 aa20.17■□□□□ 0.82
SMPD3-203ENST00000563226 ATF7P17544 494 aaPredicted RBP20.17■□□□□ 0.82
SMPD3-203ENST00000563226 HOXC8P31273 242 aa20.17■□□□□ 0.82
SMPD3-203ENST00000563226 GSCP56915 257 aaPredicted RBP20.17■□□□□ 0.82
SMPD3-203ENST00000563226 SPOCD1Q6ZMY3 1216 aa20.17■□□□□ 0.82
SMPD3-203ENST00000563226 RBM41Q96IZ5 413 aaKnown RBP20.17■□□□□ 0.82
SMPD3-203ENST00000563226 HCRTO43612 131 aa20.16■□□□□ 0.82
SMPD3-203ENST00000563226 LRCH4O75427 683 aa20.16■□□□□ 0.82
SMPD3-203ENST00000563226 PFKMP08237 780 aa20.16■□□□□ 0.82
SMPD3-203ENST00000563226 IL1R2P27930 398 aa20.16■□□□□ 0.82
SMPD3-203ENST00000563226 GABRB2P47870 512 aa20.16■□□□□ 0.82
SMPD3-203ENST00000563226 PMS2P54278 862 aa20.16■□□□□ 0.82
SMPD3-203ENST00000563226 SLC25A11Q02978 314 aaKnown RBP20.16■□□□□ 0.82
SMPD3-203ENST00000563226 PTK6Q13882 451 aa20.16■□□□□ 0.82
SMPD3-203ENST00000563226 PCBP1Q15365 356 aaKnown RBP eCLIP20.16■□□□□ 0.82
SMPD3-203ENST00000563226 CCNG2Q16589 344 aa20.16■□□□□ 0.82
SMPD3-203ENST00000563226 BEST2Q8NFU1 509 aa20.16■□□□□ 0.82
SMPD3-203ENST00000563226 ASIC3Q9UHC3 531 aa20.16■□□□□ 0.82
SMPD3-203ENST00000563226 C6orf222P0C671 652 aaPredicted RBP20.15■□□□□ 0.82
SMPD3-203ENST00000563226 AKR1A1P14550 325 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 IVDP26440 423 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 ZNF268Q14587 947 aaPredicted RBP20.15■□□□□ 0.82
SMPD3-203ENST00000563226 SMTNL2Q2TAL5 461 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 GOLGA7BQ2TAP0 167 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 C9orf57Q5W0N0 161 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 LCLAT1Q6UWP7 414 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 PRUNE1Q86TP1 453 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 ACOT1Q86TX2 421 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 C7orf31Q8N865 590 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 MCRS1Q96EZ8 462 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 PIWIL1Q96J94 861 aaKnown RBP20.15■□□□□ 0.82
SMPD3-203ENST00000563226 ATP6V1G3Q96LB4 118 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 LPIN3Q9BQK8 851 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms