RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 EPHA5P54756 1037 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 TSPY1Q01534 308 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 CETN1Q12798 172 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 CUL2Q13617 745 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 KRT31Q15323 416 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 MAPRE1Q15691 268 aaKnown RBP14.33□□□□□ -0.12
CDH1-204ENST00000562118 TPD52L1Q16890 204 aaPredicted RBP14.33□□□□□ -0.12
CDH1-204ENST00000562118 CCDC142Q17RM4 750 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 VWA3BQ502W6 1294 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 SLC39A12Q504Y0 691 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 LIN9Q5TKA1 542 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 TRIM65Q6PJ69 517 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 SPATA31D4Q6ZUB0 917 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 TTC9BQ8N6N2 239 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 B3GALNT2Q8NCR0 500 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 CEP295NLQ96MC4 621 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 NECTIN4Q96NY8 510 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 ARID3AQ99856 593 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 DPEP3Q9H4B8 488 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 HMGXB4Q9UGU5 601 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 YIPF1Q9Y548 306 aa14.33□□□□□ -0.12
CDH1-204ENST00000562118 CCDC195A0A1B0GUA6 201 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 ATP2C2O75185 946 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 WEE2P0C1S8 567 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 HAPLN1P10915 354 aaPredicted RBP14.32□□□□□ -0.12
CDH1-204ENST00000562118 TBXAS1P24557 533 aaPredicted RBP14.32□□□□□ -0.12
CDH1-204ENST00000562118 MTHFRP42898 656 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 MTIF2P46199 727 aaKnown RBP14.32□□□□□ -0.12
CDH1-204ENST00000562118 WDR44Q5JSH3 913 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 RARS2Q5T160 578 aaKnown RBP14.32□□□□□ -0.12
CDH1-204ENST00000562118 PTCRAQ6ISU1 281 aaPredicted RBP14.32□□□□□ -0.12
CDH1-204ENST00000562118 PHLDB3Q6NSJ2 640 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 SCARA5Q6ZMJ2 495 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 AOPEPQ8N6M6 819 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 C12orf76Q8N812 135 aaPredicted RBP14.32□□□□□ -0.12
CDH1-204ENST00000562118 ATAD1Q8NBU5 361 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 CCDC150Q8NCX0 1101 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 PCED1BQ96HM7 432 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 TWNKQ96RR1 684 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 LRRC3Q9BY71 257 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 INTS2Q9H0H0 1204 aaKnown RBP14.32□□□□□ -0.12
CDH1-204ENST00000562118 SNX25Q9H3E2 840 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 SIX2Q9NPC8 291 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 CISHQ9NSE2 258 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 GCNT4Q9P109 453 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 MAGEC2Q9UBF1 373 aaPredicted RBP14.32□□□□□ -0.12
CDH1-204ENST00000562118 PRKAG3Q9UGI9 489 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 GTF3C4Q9UKN8 822 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 NCOR1O75376 2440 aa14.32□□□□□ -0.12
CDH1-204ENST00000562118 ANAPC1Q9H1A4 1944 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 C19orf67A6NJJ6 358 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 PTPN1P18031 435 aaKnown RBP14.31□□□□□ -0.12
CDH1-204ENST00000562118 ATF6P18850 670 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 PON1P27169 355 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 TUFMP49411 452 aaKnown RBP14.31□□□□□ -0.12
CDH1-204ENST00000562118 KCNQ1P51787 676 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 ZNF132P52740 706 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 NDST1P52848 882 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 ZNF445P59923 1031 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 KCNMA1Q12791 1236 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 DUSP4Q13115 394 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 PLD1Q13393 1074 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 CBX2Q14781 532 aaPredicted RBP14.31□□□□□ -0.12
CDH1-204ENST00000562118 PPM1LQ5SGD2 360 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 VSTM1Q6UX27 236 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 GBP6Q6ZN66 633 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 PAQR9Q6ZVX9 377 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 OR6B3Q8NGW1 331 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 MYLPFQ96A32 169 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 TNIP3Q96KP6 325 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 RIPOR3Q96MK2 946 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 KREMEN1Q96MU8 473 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 NT5C1BQ96P26 610 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 PGLYRP2Q96PD5 576 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 CYP4F11Q9HBI6 524 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 WDR6Q9NNW5 1121 aaKnown RBP14.31□□□□□ -0.12
CDH1-204ENST00000562118 CEP72Q9P209 647 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 CDH22Q9UJ99 828 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 ASB3Q9Y575 518 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 PCDHB5Q9Y5E4 795 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 NUP210Q8TEM1 1887 aaPredicted RBP14.31□□□□□ -0.12
CDH1-204ENST00000562118 TCF20Q9UGU0 1960 aaKnown RBP14.31□□□□□ -0.12
CDH1-204ENST00000562118 TTC28Q96AY4 2481 aa14.31□□□□□ -0.12
CDH1-204ENST00000562118 KIF26AQ9ULI4 1882 aaPredicted RBP14.3□□□□□ -0.12
CDH1-204ENST00000562118 SMTNL1A8MU46 457 aa14.3□□□□□ -0.12
CDH1-204ENST00000562118 A8MXQ7 604 aa14.3□□□□□ -0.12
CDH1-204ENST00000562118 TULP1O00294 542 aaPredicted RBP14.3□□□□□ -0.12
CDH1-204ENST00000562118 MICAL2O94851 1124 aa14.3□□□□□ -0.12
CDH1-204ENST00000562118 IL9P15248 144 aa14.3□□□□□ -0.12
CDH1-204ENST00000562118 RAD23BP54727 409 aa14.3□□□□□ -0.12
CDH1-204ENST00000562118 ARPP19P56211 112 aa14.3□□□□□ -0.12
CDH1-204ENST00000562118 PSMC1P62191 440 aaKnown RBP14.3□□□□□ -0.12
CDH1-204ENST00000562118 EXOC3L4Q17RC7 722 aa14.3□□□□□ -0.12
CDH1-204ENST00000562118 TJAP1Q5JTD0 557 aa14.3□□□□□ -0.12
CDH1-204ENST00000562118 PRSS36Q5K4E3 855 aa14.3□□□□□ -0.12
CDH1-204ENST00000562118 CES5AQ6NT32 575 aa14.3□□□□□ -0.12
CDH1-204ENST00000562118 LRSAM1Q6UWE0 723 aa14.3□□□□□ -0.12
CDH1-204ENST00000562118 TMC5Q6UXY8 1006 aa14.3□□□□□ -0.12
CDH1-204ENST00000562118 C4orf50Q6ZRC1 276 aa14.3□□□□□ -0.12
CDH1-204ENST00000562118 TMC8Q8IU68 726 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms