RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 EPB41L4BQ9H329 900 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 R3HDMLQ9H3Y0 253 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 PREBQ9HCU5 417 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 NINJ2Q9NZG7 142 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 GTF3C4Q9UKN8 822 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 A0A0A6YYK5 440 aaPredicted RBP12.76□□□□□ -0.37
SEC11A-206ENST00000558924 ADM5C9JUS6 153 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 ATP2A1O14983 1001 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 CETPP11597 493 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 SSTR1P30872 391 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 CUL3Q13618 768 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 TSNAXIP1Q2TAA8 658 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 ZNF568Q3ZCX4 644 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 CFAP157Q5JU67 520 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 MTHFD1LQ6UB35 978 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 ECHDC2Q86YB7 292 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 MAP4K3Q8IVH8 894 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 FBXO16Q8IX29 292 aaPredicted RBP12.76□□□□□ -0.37
SEC11A-206ENST00000558924 C7orf31Q8N865 590 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 SHC3Q92529 594 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 RAB3IPQ96QF0 476 aaPredicted RBP12.76□□□□□ -0.37
SEC11A-206ENST00000558924 FHDC1Q9C0D6 1143 aaPredicted RBP12.76□□□□□ -0.37
SEC11A-206ENST00000558924 CHCHD3Q9NX63 227 aaKnown RBP12.76□□□□□ -0.37
SEC11A-206ENST00000558924 CYP39A1Q9NYL5 469 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 STXBP5LQ9Y2K9 1186 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 NUB1Q9Y5A7 615 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 F8VP50 259 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 MAPK13O15264 365 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 GYG2O15488 501 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 ASAP2O43150 1006 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 DKC1O60832 514 aaKnown RBP eCLIP12.76□□□□□ -0.37
SEC11A-206ENST00000558924 TTC4O95801 387 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 RPA3P35244 121 aaPredicted RBP12.76□□□□□ -0.37
SEC11A-206ENST00000558924 PTDSS1P48651 473 aaKnown RBP12.76□□□□□ -0.37
SEC11A-206ENST00000558924 TAS2R40P59535 323 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 GRM1Q13255 1194 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 PGM2Q96G03 612 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 FAM49AQ9H0Q0 323 aaPredicted RBP12.76□□□□□ -0.37
SEC11A-206ENST00000558924 NRBP2Q9NSY0 501 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 NEU2Q9Y3R4 380 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 PTPRJQ12913 1337 aa12.76□□□□□ -0.37
SEC11A-206ENST00000558924 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
SEC11A-206ENST00000558924 GSTA1P08263 222 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 SERPINB4P48594 390 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 BNIP1Q12981 228 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 EFTUD2Q15029 972 aaKnown RBP eCLIP12.75□□□□□ -0.37
SEC11A-206ENST00000558924 FAXCQ5TGI0 409 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 ZC3H3Q8IXZ2 948 aaKnown RBP12.75□□□□□ -0.37
SEC11A-206ENST00000558924 RASGEF1CQ8N431 466 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 AGR3Q8TD06 166 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 P3H4Q92791 437 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 OSBPL8Q9BZF1 889 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 ARHGEF3Q9NR81 526 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 ANKEF1Q9NU02 776 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 HOXC10Q9NYD6 342 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 FAM47DPA6NHR8 397 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 SRRM3A6NNA2 597 aaPredicted RBP12.75□□□□□ -0.37
SEC11A-206ENST00000558924 NFKBIEO00221 500 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 LUC7L3O95232 432 aaKnown RBP12.75□□□□□ -0.37
SEC11A-206ENST00000558924 TPP2P29144 1249 aaPredicted RBP12.75□□□□□ -0.37
SEC11A-206ENST00000558924 FOXN2P32314 431 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 RGS7P49802 495 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 SPARCL1Q14515 664 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 TMEM63BQ5T3F8 832 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 GPAT2Q6NUI2 795 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 MYLK4Q86YV6 388 aaPredicted RBP12.75□□□□□ -0.37
SEC11A-206ENST00000558924 MCOLN2Q8IZK6 566 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 GLIS1Q8NBF1 620 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.75□□□□□ -0.37
SEC11A-206ENST00000558924 FAM161BQ96MY7 647 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 NOCTQ9UK39 431 aaKnown RBP12.75□□□□□ -0.37
SEC11A-206ENST00000558924 PCDHB2Q9Y5E7 798 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 RGS20O76081 388 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 GLRA2P23416 452 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 DSG3P32926 999 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 ITIH4Q14624 930 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 SLFN11Q7Z7L1 901 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 UBA3Q8TBC4 463 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 PYROXD1Q8WU10 500 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 CLMNQ96JQ2 1002 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 TXLNGQ9NUQ3 528 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 TAF1LQ8IZX4 1826 aa12.75□□□□□ -0.37
SEC11A-206ENST00000558924 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.74□□□□□ -0.37
SEC11A-206ENST00000558924 B4GALT5O43286 388 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 PEX11AO75192 247 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 CDH16O75309 829 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 OATP04181 439 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 MAPTP10636 758 aaKnown RBP12.74□□□□□ -0.37
SEC11A-206ENST00000558924 CCNFP41002 786 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 PTGIRP43119 386 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 CUL2Q13617 745 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 RCN1Q15293 331 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 AMHR2Q16671 573 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 ZNF699Q32M78 642 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 C1QTNF12Q5T7M4 302 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 TTC16Q8NEE8 873 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 CFAP36Q96G28 342 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 FGD4Q96M96 766 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 SPATA33Q96N06 139 aa12.74□□□□□ -0.37
SEC11A-206ENST00000558924 HERPUD2Q9BSE4 406 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms