RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 TMEM196Q5HYL7 178 aa17.29■□□□□ 0.36
CDC42BPB-203ENST00000558867 RNF43Q68DV7 783 aa17.29■□□□□ 0.36
CDC42BPB-203ENST00000558867 KBTBD6Q86V97 674 aa17.29■□□□□ 0.36
CDC42BPB-203ENST00000558867 CMTM8Q8IZV2 173 aa17.29■□□□□ 0.36
CDC42BPB-203ENST00000558867 CCDC26Q8TAB7 109 aa17.29■□□□□ 0.36
CDC42BPB-203ENST00000558867 SPPL2BQ8TCT7 592 aa17.29■□□□□ 0.36
CDC42BPB-203ENST00000558867 FAM212AQ96EL1 285 aa17.29■□□□□ 0.36
CDC42BPB-203ENST00000558867 LSM14BQ9BX40 385 aaKnown RBP17.29■□□□□ 0.36
CDC42BPB-203ENST00000558867 NUP62CLQ9H1M0 184 aa17.29■□□□□ 0.36
CDC42BPB-203ENST00000558867 SPAG17Q6Q759 2223 aa17.29■□□□□ 0.36
CDC42BPB-203ENST00000558867 CACNA1GO43497 2377 aa17.29■□□□□ 0.36
CDC42BPB-203ENST00000558867 SDK1Q7Z5N4 2213 aa17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 SOBPA7XYQ1 873 aa17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 TRDMT1O14717 391 aaKnown RBP17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 HNRNPDLO14979 420 aaKnown RBP17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 KCNK5O95279 499 aa17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 PRAMEF12O95522 483 aa17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 PXNP49023 591 aaPredicted RBP17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 CYP4F8P98187 520 aa17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 CCDC6Q16204 474 aa17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 WDR44Q5JSH3 913 aa17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 PLA2G2CQ5R387 149 aa17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 DAB2IPQ5VWQ8 1189 aa17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 SPATA1Q5VX52 437 aa17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 SYT2Q8N9I0 419 aaPredicted RBP17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 GRPEL1Q9HAV7 217 aa17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 C2orf42Q9NWW7 574 aa17.28■□□□□ 0.36
CDC42BPB-203ENST00000558867 CFAP47Q6ZTR5 3102 aa17.27■□□□□ 0.36
CDC42BPB-203ENST00000558867 PP2D1A8MPX8 630 aa17.27■□□□□ 0.36
CDC42BPB-203ENST00000558867 SOAT2O75908 522 aa17.27■□□□□ 0.36
CDC42BPB-203ENST00000558867 CYP11A1P05108 521 aa17.27■□□□□ 0.36
CDC42BPB-203ENST00000558867 PDGFRLQ15198 375 aa17.27■□□□□ 0.36
CDC42BPB-203ENST00000558867 C11orf74Q86VG3 221 aa17.27■□□□□ 0.36
CDC42BPB-203ENST00000558867 DCP1BQ8IZD4 617 aaKnown RBP17.27■□□□□ 0.36
CDC42BPB-203ENST00000558867 FMR1NBQ8N0W7 255 aaPredicted RBP17.27■□□□□ 0.36
CDC42BPB-203ENST00000558867 LPIN3Q9BQK8 851 aa17.27■□□□□ 0.36
CDC42BPB-203ENST00000558867 FAM83CQ9BQN1 747 aa17.27■□□□□ 0.36
CDC42BPB-203ENST00000558867 FUCA2Q9BTY2 467 aa17.27■□□□□ 0.36
CDC42BPB-203ENST00000558867 SLC46A2Q9BY10 475 aa17.27■□□□□ 0.36
CDC42BPB-203ENST00000558867 DERAQ9Y315 318 aa17.27■□□□□ 0.36
CDC42BPB-203ENST00000558867 MYH11P35749 1972 aa17.27■□□□□ 0.36
CDC42BPB-203ENST00000558867 RNF40O75150 1001 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 PROS1P07225 676 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 CDC25AP30304 524 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 TNFSF9P41273 254 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 NCKAP1LP55160 1127 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 TMEM132DQ14C87 1099 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 ENOX2Q16206 610 aaKnown RBP17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 C9orf57Q5W0N0 161 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 TTC9BQ8N6N2 239 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 KRI1Q8N9T8 703 aaKnown RBP17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 FSIP1Q8NA03 581 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 GIPC2Q8TF65 315 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 MRPS31Q92665 395 aaKnown RBP17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 ACDQ96AP0 544 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 TIGD1Q96MW7 591 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 MSTO1Q9BUK6 570 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 ZCWPW1Q9H0M4 648 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 TSPY26PQ9H489 355 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 GOLPH3LQ9H4A5 285 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 EBF3Q9H4W6 596 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 TDP1Q9NUW8 608 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 ODF2LQ9ULJ1 636 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 HPSEQ9Y251 543 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 PCDHB6Q9Y5E3 794 aa17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 SRPRBQ9Y5M8 271 aaKnown RBP17.26■□□□□ 0.35
CDC42BPB-203ENST00000558867 ZFHX4Q86UP3 3567 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 APBB3O95704 486 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 ADRB2P07550 413 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 PLA2G4BP0C869 781 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 GUCY2FP51841 1108 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 PLK5Q496M5 336 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 HYIQ5T013 277 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 RESP18Q5W5W9 173 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 JADE1Q6IE81 842 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 FSTL4Q6MZW2 842 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 PSAPL1Q6NUJ1 521 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 KCNK18Q7Z418 384 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 ELOA2Q8IYF1 753 aaPredicted RBP17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 CPA6Q8N4T0 437 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 MAB21L3Q8N8X9 362 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 KCNN1Q92952 543 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 P2RY13Q9BPV8 354 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 MMTAG2Q9BU76 263 aaKnown RBP17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 SMG9Q9H0W8 520 aaKnown RBP17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 ASB7Q9H672 318 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 IL21Q9HBE4 155 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 RXFP3Q9NSD7 469 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 UXTQ9UBK9 157 aaPredicted RBP17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 FBXO2Q9UK22 296 aaPredicted RBP17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 TBX20Q9UMR3 447 aa17.25■□□□□ 0.35
CDC42BPB-203ENST00000558867 PIRO00625 290 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 CYB561D2O14569 222 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 CAVIN2O95810 425 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 CSH1P0DML2 217 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 CSH2P0DML3 217 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 HAPLN1P10915 354 aaPredicted RBP17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 ATF6P18850 670 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 TAF6P49848 677 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms