RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 TOM1L1O75674 476 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 PRAMEF12O95522 483 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 HARSP12081 509 aaKnown RBP5.62□□□□□ -1.51
SPG11-208ENST00000558155 ENGP17813 658 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 PROZP22891 400 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 MCM7P33993 719 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 CCT6AP40227 531 aaKnown RBP5.62□□□□□ -1.51
SPG11-208ENST00000558155 MATR3P43243 847 aaKnown RBP eCLIP5.62□□□□□ -1.51
SPG11-208ENST00000558155 NPTX2P47972 431 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 AARSP49588 968 aaKnown RBP eCLIP5.62□□□□□ -1.51
SPG11-208ENST00000558155 SMTNP53814 917 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 CYP4F8P98187 520 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 SCRN1Q12765 414 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 STRN3Q13033 797 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 TRIM29Q14134 588 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 ZNF268Q14587 947 aaPredicted RBP5.62□□□□□ -1.51
SPG11-208ENST00000558155 KYAT1Q16773 422 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 ZNF423Q2M1K9 1284 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 MGAT5BQ3V5L5 792 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 SPDYCQ5MJ68 293 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 HAUS3Q68CZ6 603 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 LMBRD2Q68DH5 695 aaPredicted RBP5.62□□□□□ -1.51
SPG11-208ENST00000558155 TRIM68Q6AZZ1 485 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 C19orf48Q6RUI8 117 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 LPCAT2Q7L5N7 544 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 PIP4P1Q86T03 277 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 PDZD3Q86UT5 571 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 MON1AQ86VX9 555 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 METTL23Q86XA0 190 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 SYT12Q8IV01 421 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 THEM5Q8N1Q8 247 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 CHCHD4Q8N4Q1 142 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 MAB21L3Q8N8X9 362 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 GIPC2Q8TF65 315 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 C2orf15Q8WU43 125 aaKnown RBP5.62□□□□□ -1.51
SPG11-208ENST00000558155 MRPS31Q92665 395 aaKnown RBP5.62□□□□□ -1.51
SPG11-208ENST00000558155 USP13Q92995 863 aaPredicted RBP5.62□□□□□ -1.51
SPG11-208ENST00000558155 TNFRSF25Q93038 417 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 CHFRQ96EP1 664 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 ZBTB45Q96K62 511 aaPredicted RBP5.62□□□□□ -1.51
SPG11-208ENST00000558155 CNOT6LQ96LI5 555 aaKnown RBP5.62□□□□□ -1.51
SPG11-208ENST00000558155 DRC1Q96MC2 740 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 SEPT5Q99719 369 aaPredicted RBP5.62□□□□□ -1.51
SPG11-208ENST00000558155 LPIN3Q9BQK8 851 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 SMG9Q9H0W8 520 aaKnown RBP5.62□□□□□ -1.51
SPG11-208ENST00000558155 BHMT2Q9H2M3 363 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 ECT2Q9H8V3 914 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 C17orf75Q9HAS0 396 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 IL21Q9HBE4 155 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 DUS2Q9NX74 493 aaKnown RBP5.62□□□□□ -1.51
SPG11-208ENST00000558155 KLK13Q9UKR3 277 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 UBQLN1Q9UMX0 589 aaKnown RBP5.62□□□□□ -1.51
SPG11-208ENST00000558155 KIAA1024Q9UPX6 916 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 DNM3Q9UQ16 869 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 GPSM3Q9Y4H4 160 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 PCDHB9Q9Y5E1 797 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 PFKFB2O60825 505 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 OPHN1O60890 802 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 SOAT2O75908 522 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 LARGE1O95461 756 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 F11P03951 625 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 CLTAP09496 248 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 USP17L7P0C7H9 530 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 CSH1P0DML2 217 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 CSH2P0DML3 217 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 HAPLN1P10915 354 aaPredicted RBP5.61□□□□□ -1.51
SPG11-208ENST00000558155 ODC1P11926 461 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 ARSAP15289 507 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 U2AF2P26368 475 aaKnown RBP eCLIP5.61□□□□□ -1.512e-6■■■■□ 25.3
SPG11-208ENST00000558155 MAPK8P45983 427 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 IFNAR2P48551 515 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 NLRP12P59046 1061 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 LILRA4P59901 499 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 MRPS21P82921 87 aaKnown RBP5.61□□□□□ -1.51
SPG11-208ENST00000558155 PPP2R3AQ06190 1150 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 GFPT1Q06210 699 aaPredicted RBP5.61□□□□□ -1.51
SPG11-208ENST00000558155 SPAG1Q07617 926 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 SCAPQ12770 1279 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 SEMA3BQ13214 749 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 NOLC1Q14978 699 aaKnown RBP eCLIP5.61□□□□□ -1.51
SPG11-208ENST00000558155 SAFBQ15424 915 aaKnown RBP eCLIP5.61□□□□□ -1.51
SPG11-208ENST00000558155 ZNF174Q15697 407 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 ZBTB6Q15916 424 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 DUOXA1Q1HG43 343 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 COL28A1Q2UY09 1125 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 SLC39A12Q504Y0 691 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 C2orf27AQ580R0 203 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 DENND4CQ5VZ89 1909 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 TXNDC8Q6A555 127 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 ANO7Q6IWH7 933 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 SLC23A3Q6PIS1 610 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 ZPBP2Q6X784 338 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 RABEPKQ7Z6M1 372 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 RASSF3Q86WH2 238 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 TTC30AQ86WT1 665 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 DIS3L2Q8IYB7 885 aaKnown RBP5.61□□□□□ -1.51
SPG11-208ENST00000558155 DCP1BQ8IZD4 617 aaKnown RBP5.61□□□□□ -1.51
SPG11-208ENST00000558155 CEP76Q8TAP6 659 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 SPPL2BQ8TCT7 592 aa5.61□□□□□ -1.51
SPG11-208ENST00000558155 USP33Q8TEY7 942 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms