RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 WDR91A4D1P6 747 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 J3QRK9 145 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 TXNDC9O14530 226 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 IRS4O14654 1257 aaPredicted RBP11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 RASGRF2O14827 1237 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 NDUFA2O43678 99 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 MAP3K7CLP57077 242 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 CTBSQ01459 385 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 SNTA1Q13424 505 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 PTK2BQ14289 1009 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 CORO6Q6QEF8 472 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 SH3RF1Q7Z6J0 888 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 CROCCP2Q86T23 111 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 PRUNE1Q86TP1 453 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 CCDC28AQ8IWP9 274 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 CARNMT1Q8N4J0 409 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 SCFD1Q8WVM8 642 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 FBXL8Q96CD0 374 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 WNK4Q96J92 1243 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 RIOK1Q9BRS2 568 aaKnown RBP11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 USP44Q9H0E7 712 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 GPAMQ9HCL2 828 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 BCAP29Q9UHQ4 241 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 ADAMTS6Q9UKP5 1117 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 PHTF1Q9UMS5 762 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 FAM208AQ9UK61 1670 aaKnown RBP11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 PCDH11YQ9BZA8 1340 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 CAPN8A6NHC0 703 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 SLC9A3R1O14745 358 aaPredicted RBP11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 ZWINTO95229 277 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 TNFAIP8O95379 198 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 ALDH3B2P48448 385 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 GK3PQ14409 553 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 MAPK6Q16659 721 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 TYW1BQ6NUM6 668 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 DBX2Q6ZNG2 339 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 MTDHQ86UE4 582 aaKnown RBP11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 SPOCK2Q92563 424 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 CCDC8Q9H0W5 538 aaPredicted RBP11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 TRIT1Q9H3H1 467 aaKnown RBP11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 MOV10Q9HCE1 1003 aaKnown RBP11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 KCTD5Q9NXV2 234 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 FBXO2Q9UK22 296 aaPredicted RBP11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 SLC8A2Q9UPR5 921 aa11.54□□□□□ -0.56
SEMA4B-204ENST00000558065 TRAV6A0A075B6T7 132 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 FAM170AA1A519 330 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 KPNA6O60684 536 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 FGF18O76093 207 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 OR5F1O95221 314 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 SRGNP10124 158 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 ARL1P40616 181 aaPredicted RBP11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 PLTPP55058 493 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 NCKAP1LP55160 1127 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 UBXN2AP68543 259 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 TMC5Q6UXY8 1006 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 SNX29Q8TEQ0 813 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 ATP2A3Q93084 1043 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 MROQ9BYG7 248 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 DNMT3BQ9UBC3 853 aaKnown RBP11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 B3GNT3Q9Y2A9 372 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 A0A1B0GTW7 788 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 LINC01387J3KSC0 135 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 FOXO3O43524 673 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 PRLP01236 227 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 ITGA4P13612 1032 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 CIITAP33076 1130 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 PHC1P78364 1004 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 EHHADHQ08426 723 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 EXOC3L4Q17RC7 722 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 HP1BP3Q5SSJ5 553 aaPredicted RBP11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 PPP4R4Q6NUP7 873 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 TTI2Q6NXR4 508 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 BARGINQ6ZT62 677 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 USP49Q70CQ1 688 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 ADGRG5Q8IZF4 528 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 PPM1KQ8N3J5 372 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 TDRD1Q9BXT4 1180 aaKnown RBP11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 PLEKHA5Q9HAU0 1116 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 PADI4Q9UM07 663 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 SCINQ9Y6U3 715 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 DLC1Q96QB1 1528 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 MYO5BQ9ULV0 1848 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 A0A087X0B3 334 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 HOXB1P14653 301 aaPredicted RBP11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 PDE6AP16499 860 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 EIF4A3P38919 411 aaKnown RBP11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 SLC26A2P50443 739 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 BMXP51813 675 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 HK2P52789 917 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 TMPRSS15P98073 1019 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 FKBP4Q02790 459 aaKnown RBP eCLIP11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 PPP6R3Q5H9R7 873 aaPredicted RBP11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 XKR5Q6UX68 686 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 FAM83AQ86UY5 434 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 BEND7Q8N7W2 519 aaPredicted RBP11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 APPL2Q8NEU8 664 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 SLC22A8Q8TCC7 542 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 TRIM51Q9BSJ1 452 aa11.53□□□□□ -0.56
SEMA4B-204ENST00000558065 TARS2Q9BW92 718 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms