RNA–Protein interactions for RNA: ENST00000557380.5

NEMF-215, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 1,742 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-215ENST00000557380 CNGA2Q16280 664 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 CCL14Q16627 93 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 ZNF394Q53GI3 561 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 CFAP58Q5T655 872 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 DNAJC24Q6P3W2 148 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 LRIG3Q6UXM1 1119 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 RUFY4Q6ZNE9 571 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 LRRC52Q8N7C0 313 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 HHIPL1Q96JK4 782 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 CELF4Q9BZC1 486 aaKnown RBP9.08□□□□□ -0.96
NEMF-215ENST00000557380 ELOVL4Q9GZR5 314 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 FAM49AQ9H0Q0 323 aaPredicted RBP9.08□□□□□ -0.96
NEMF-215ENST00000557380 SMYD3Q9H7B4 428 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 CNTN3Q9P232 1028 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 PARP2Q9UGN5 583 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 FEZ2Q9UHY8 353 aaPredicted RBP9.08□□□□□ -0.96
NEMF-215ENST00000557380 ADAM21Q9UKJ8 722 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 FAN1Q9Y2M0 1017 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 TLL2Q9Y6L7 1015 aa9.08□□□□□ -0.96
NEMF-215ENST00000557380 PDCD11Q14690 1871 aaKnown RBP9.07□□□□□ -0.96
NEMF-215ENST00000557380 SRCAPQ6ZRS2 3230 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 C17orf102A2RUQ5 167 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 SIGLEC16A6NMB1 481 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 SMAPO00193 183 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 RNF40O75150 1001 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 CD19P15391 556 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 PTPN7P35236 360 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 CETN2P41208 172 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 RAP1GAPP47736 663 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 COPS2P61201 443 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 PURAQ00577 322 aaKnown RBP9.07□□□□□ -0.96
NEMF-215ENST00000557380 DMTNQ08495 405 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 KLF1Q13351 362 aaPredicted RBP9.07□□□□□ -0.96
NEMF-215ENST00000557380 HIC1Q14526 733 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 ZNF268Q14587 947 aaPredicted RBP9.07□□□□□ -0.96
NEMF-215ENST00000557380 SNX17Q15036 470 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 FSCN1Q16658 493 aaKnown RBP9.07□□□□□ -0.96
NEMF-215ENST00000557380 PTPN20Q4JDL3 420 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 C2CD6Q53TS8 623 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 XKR4Q5GH76 650 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 LLGL2Q6P1M3 1020 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 TAF2Q6P1X5 1199 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 DENND1BQ6P3S1 775 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 TTC27Q6P3X3 843 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 CCDC137Q6PK04 289 aaKnown RBP9.07□□□□□ -0.96
NEMF-215ENST00000557380 ADAT2Q7Z6V5 191 aaKnown RBP9.07□□□□□ -0.96
NEMF-215ENST00000557380 RCOR2Q8IZ40 523 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 BEST2Q8NFU1 509 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 PIK3R5Q8WYR1 880 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 C18orf8Q96DM3 657 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 RBM41Q96IZ5 413 aaKnown RBP9.07□□□□□ -0.96
NEMF-215ENST00000557380 RUFY1Q96T51 708 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 OSMRQ99650 979 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 TXLNGYQ9BZA5 131 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 MIS12Q9H081 205 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 ZDHHC18Q9NUE0 388 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 VPS18Q9P253 973 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.07□□□□□ -0.96
NEMF-215ENST00000557380 TRIP11Q15643 1979 aa9.07□□□□□ -0.96
NEMF-215ENST00000557380 TCRBV7S2A1N4TA0A589 114 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 O00370 1275 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 TREHO43280 583 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 CA12O43570 354 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 PPFIA2O75334 1257 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 RPLP2P05387 115 aaKnown RBP9.06□□□□□ -0.96
NEMF-215ENST00000557380 MYL3P08590 195 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 FGFR4P22455 802 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 SSTR3P32745 418 aaPredicted RBP9.06□□□□□ -0.96
NEMF-215ENST00000557380 MLLT3P42568 568 aaPredicted RBP9.06□□□□□ -0.96
NEMF-215ENST00000557380 GUCY2FP51841 1108 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 CDH8P55286 799 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 GJA9P57773 515 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 TAS2R40P59535 323 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 RPL7AP62424 266 aaKnown RBP9.06□□□□□ -0.96
NEMF-215ENST00000557380 ZNF252P-AS1Q0IIN9 211 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 CRHR2Q13324 411 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 ACAP1Q15027 740 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 DCUN1D2Q6PH85 259 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 LCLAT1Q6UWP7 414 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 POLNQ7Z5Q5 900 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 PHLDB2Q86SQ0 1253 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 UNC93AQ86WB7 457 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 DDX42Q86XP3 938 aaKnown RBP eCLIP9.06□□□□□ -0.96
NEMF-215ENST00000557380 GRK7Q8WTQ7 553 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 DNAJB3Q8WWF6 145 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 ZIM3Q96PE6 472 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 TWNKQ96RR1 684 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 FMO2Q99518 471 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 TRIM51Q9BSJ1 452 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 NT5C1AQ9BXI3 368 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 UPF3AQ9H1J1 476 aaKnown RBP9.06□□□□□ -0.96
NEMF-215ENST00000557380 NEUROG2Q9H2A3 272 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 PLEKHA4Q9H4M7 779 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 DDX56Q9NY93 547 aaKnown RBP9.06□□□□□ -0.96
NEMF-215ENST00000557380 SNTG2Q9NY99 539 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 UBQLN1Q9UMX0 589 aaKnown RBP9.06□□□□□ -0.96
NEMF-215ENST00000557380 TRIP12Q14669 1992 aaPredicted RBP9.06□□□□□ -0.96
NEMF-215ENST00000557380 SCN10AQ9Y5Y9 1956 aa9.06□□□□□ -0.96
NEMF-215ENST00000557380 XPOTO43592 962 aaKnown RBP9.05□□□□□ -0.96
NEMF-215ENST00000557380 MICAL2O94851 1124 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms