RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 CEP120Q8N960 986 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 SNX29Q8TEQ0 813 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 TCEAL4Q96EI5 215 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 UCN2Q96RP3 112 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 RTKNQ9BST9 563 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 C8orf33Q9H7E9 229 aaPredicted RBP9.44□□□□□ -0.9
VRK1-206ENST00000557222 ASAH2Q9NR71 780 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 SH2B1Q9NRF2 756 aaPredicted RBP9.44□□□□□ -0.9
VRK1-206ENST00000557222 HSFX1Q9UBD0 423 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 ASB3Q9Y575 518 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 CNOT1A5YKK6 2376 aaKnown RBP9.44□□□□□ -0.9
VRK1-206ENST00000557222 CHD8Q9HCK8 2581 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 OR6C75A6NL08 312 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 ZNF263O14978 683 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 CHADO15335 359 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 SLC26A4O43511 780 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 XPOTO43592 962 aaKnown RBP9.43□□□□□ -0.9
VRK1-206ENST00000557222 MOSPD3O75425 235 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 FGF19O95750 216 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 CLTAP09496 248 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 PLS3P13797 630 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 MX2P20592 715 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 TGM1P22735 817 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 WEE1P30291 646 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 MCM4P33991 863 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 CCR2P41597 374 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 AARSP49588 968 aaKnown RBP eCLIP9.43□□□□□ -0.9
VRK1-206ENST00000557222 ARPP19P56211 112 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 OSTNP61366 133 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 MCL1Q07820 350 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 MAPK7Q13164 816 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 NOLC1Q14978 699 aaKnown RBP eCLIP9.43□□□□□ -0.9
VRK1-206ENST00000557222 ZBTB6Q15916 424 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 SLC10A6Q3KNW5 377 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 HYIQ5T013 277 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 LAIR1Q6GTX8 287 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 VITQ6UXI7 678 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 DTHD1Q6ZMT9 781 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 ZNF295-AS1Q8N0V1 137 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 FAM184AQ8NB25 1140 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 TMEM161BQ8NDZ6 487 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 FAM3CQ92520 227 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 TBC1D32Q96NH3 1257 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 POLD4Q9HCU8 107 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 CEP72Q9P209 647 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 GMEB2Q9UKD1 530 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 RAB23Q9ULC3 237 aa9.43□□□□□ -0.9
VRK1-206ENST00000557222 KMT2BQ9UMN6 2715 aaPredicted RBP9.42□□□□□ -0.9
VRK1-206ENST00000557222 E9PMD0 336 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 ARNTLO00327 626 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 CDK2AP1O14519 115 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 CLDN3O15551 220 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 ADRB2P07550 413 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 RETP07949 1114 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 MAPTP10636 758 aaKnown RBP9.42□□□□□ -0.9
VRK1-206ENST00000557222 CHRNB1P11230 501 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 TYMPP19971 482 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 GDI1P31150 447 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 HOXA6P31267 233 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 ABCD1P33897 745 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 CXCL12P48061 93 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 TOB1P50616 345 aaPredicted RBP9.42□□□□□ -0.9
VRK1-206ENST00000557222 ATXN1P54253 815 aaKnown RBP9.42□□□□□ -0.9
VRK1-206ENST00000557222 EPHB3P54753 998 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 YWHAHQ04917 246 aaPredicted RBP9.42□□□□□ -0.9
VRK1-206ENST00000557222 FCHO2Q0JRZ9 810 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 KCNMA1Q12791 1236 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 TWF1Q12792 350 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 GPR17Q13304 367 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 MYBPC2Q14324 1141 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 LRRC32Q14392 662 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 GRM2Q14416 872 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 DGKKQ5KSL6 1271 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 ERICH6BQ5W0A0 696 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 CCDC83Q8IWF9 413 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 CD302Q8IX05 232 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 SYNPOQ8N3V7 929 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 SPEM1Q8N4L4 309 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 SYT2Q8N9I0 419 aaPredicted RBP9.42□□□□□ -0.9
VRK1-206ENST00000557222 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
VRK1-206ENST00000557222 ZSCAN18Q8TBC5 510 aaPredicted RBP9.42□□□□□ -0.9
VRK1-206ENST00000557222 C18orf25Q96B23 403 aaPredicted RBP9.42□□□□□ -0.9
VRK1-206ENST00000557222 RUSC1Q9BVN2 902 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 LRRC3Q9BY71 257 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 CRISPLD1Q9H336 500 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 LMAN1LQ9HAT1 526 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 OBP2AQ9NY56 170 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 LARSQ9P2J5 1176 aaKnown RBP9.42□□□□□ -0.9
VRK1-206ENST00000557222 ZMYM5Q9UJ78 669 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 UBQLN1Q9UMX0 589 aaKnown RBP9.42□□□□□ -0.9
VRK1-206ENST00000557222 USP3Q9Y6I4 520 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 PIAS3Q9Y6X2 628 aa9.42□□□□□ -0.9
VRK1-206ENST00000557222 TTC26A0AVF1 554 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 HEPACAM2A8MVW5 462 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 SLC16A4O15374 487 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 MEFVO15553 781 aaPredicted RBP9.41□□□□□ -0.9
VRK1-206ENST00000557222 MYL4P12829 197 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 CPB1P15086 417 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 ALDH1A3P47895 512 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 GSK3AP49840 483 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms