RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 TNFSF13BQ9Y275 285 aa13.78□□□□□ -0.2
PSEN1-219ENST00000556951 COL12A1Q99715 3063 aa13.78□□□□□ -0.2
PSEN1-219ENST00000556951 CCDC163A0A0D9SF12 145 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 KRT38O76015 456 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 SMC2O95347 1197 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 CAVIN2O95810 425 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 NTRK1P04629 796 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 MPLP40238 635 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 GRM5P41594 1212 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 STAT6P42226 847 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 POSTNQ15063 836 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 ZRSR1Q15695 479 aaKnown RBP13.77□□□□□ -0.21
PSEN1-219ENST00000556951 TMEM132AQ24JP5 1023 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 L1TD1Q5T7N2 865 aaKnown RBP13.77□□□□□ -0.21
PSEN1-219ENST00000556951 GAREM2Q75VX8 874 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 SYNPOQ8N3V7 929 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 ERMNQ8TAM6 284 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 C18orf25Q96B23 403 aaPredicted RBP13.77□□□□□ -0.21
PSEN1-219ENST00000556951 CHFRQ96EP1 664 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 MMTAG2Q9BU76 263 aaKnown RBP13.77□□□□□ -0.21
PSEN1-219ENST00000556951 MAGEF1Q9HAY2 307 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 ASAH2Q9NR71 780 aa13.77□□□□□ -0.21
PSEN1-219ENST00000556951 POLR3BQ9NW08 1133 aaPredicted RBP13.77□□□□□ -0.21
PSEN1-219ENST00000556951 A0A1W2PRU2 124 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 ABLIM1O14639 778 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 ATXN7O15265 892 aaPredicted RBP13.76□□□□□ -0.21
PSEN1-219ENST00000556951 RPP40O75818 363 aaKnown RBP13.76□□□□□ -0.21
PSEN1-219ENST00000556951 KCNE1P15382 129 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 TNK2Q07912 1038 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 PNOCQ13519 176 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 STX1AQ16623 288 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 PADI6Q6TGC4 694 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 YAF2Q8IY57 180 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 ELMOD1Q8N336 334 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 DDX12PQ92771 950 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 CDK5RAP3Q96JB5 506 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 CCDC43Q96MW1 224 aaKnown RBP13.76□□□□□ -0.21
PSEN1-219ENST00000556951 RBSNQ9H1K0 784 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 CDT1Q9H211 546 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 CCDC86Q9H6F5 360 aaKnown RBP13.76□□□□□ -0.21
PSEN1-219ENST00000556951 ANO10Q9NW15 660 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 YIPF1Q9Y548 306 aa13.76□□□□□ -0.21
PSEN1-219ENST00000556951 EML5Q05BV3 1969 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 MYL1P05976 194 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 PLCG1P19174 1290 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 RPL9P32969 192 aaKnown RBP13.75□□□□□ -0.21
PSEN1-219ENST00000556951 OSTNP61366 133 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 PLK5Q496M5 336 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 ARHGAP29Q52LW3 1261 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 HYIQ5T013 277 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 TAS1R3Q7RTX0 852 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 DEFB124Q8NES8 71 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 DEPTORQ8TB45 409 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 SNX29Q8TEQ0 813 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 SMARCE1Q969G3 411 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 PNMA5Q96PV4 448 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 NACC1Q96RE7 527 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 ACO2Q99798 780 aaKnown RBP13.75□□□□□ -0.21
PSEN1-219ENST00000556951 POLR3CQ9BUI4 534 aaPredicted RBP13.75□□□□□ -0.21
PSEN1-219ENST00000556951 DUSP15Q9H1R2 295 aaPredicted RBP13.75□□□□□ -0.21
PSEN1-219ENST00000556951 GRPEL1Q9HAV7 217 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 TUFT1Q9NNX1 390 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 STK17AQ9UEE5 414 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 RAXQ9Y2V3 346 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 PCDHA5Q9Y5H7 936 aa13.75□□□□□ -0.21
PSEN1-219ENST00000556951 URB1O60287 2271 aaKnown RBP13.75□□□□□ -0.21
PSEN1-219ENST00000556951 ASCC3Q8N3C0 2202 aaKnown RBP13.75□□□□□ -0.21
PSEN1-219ENST00000556951 OAZ2O95190 189 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 OR4Q2P0C623 313 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 CCT6AP40227 531 aaKnown RBP13.74□□□□□ -0.21
PSEN1-219ENST00000556951 AFMP43652 599 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 EFNA5P52803 228 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 NLRP12P59046 1061 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 AMPD3Q01432 767 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 ECM1Q16610 540 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 TMEM119Q4V9L6 283 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 HAUS3Q68CZ6 603 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 FSTL4Q6MZW2 842 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 ZNF280DQ6N043 979 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 KCTD17Q8N5Z5 321 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 SPATA20Q8TB22 786 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 ERCC4Q92889 916 aaPredicted RBP13.74□□□□□ -0.21
PSEN1-219ENST00000556951 PLIN2Q99541 437 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 LRRC27Q9C0I9 530 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 SLITRK6Q9H5Y7 841 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 FBRSL1Q9HCM7 1045 aaKnown RBP13.74□□□□□ -0.21
PSEN1-219ENST00000556951 SLC38A7Q9NVC3 462 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 KBTBD4Q9NVX7 518 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 OBP2AQ9NY56 170 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 CNTN3Q9P232 1028 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 PCDHB8Q9UN66 801 aa13.74□□□□□ -0.21
PSEN1-219ENST00000556951 OTOL1A6NHN0 477 aaPredicted RBP13.73□□□□□ -0.21
PSEN1-219ENST00000556951 H0Y626 953 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 K7ERI5 159 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 AKAP3O75969 853 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 TRIM16O95361 564 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 PRAMEF12O95522 483 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 PROZP22891 400 aa13.73□□□□□ -0.21
PSEN1-219ENST00000556951 WEE1P30291 646 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms