RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 SMIM22K7EJ46 135 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 P4HA2O15460 535 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 DKC1O60832 514 aaKnown RBP eCLIP6.58□□□□□ -1.36
CPSF2-205ENST00000556622 SHOX2O60902 331 aaPredicted RBP6.58□□□□□ -1.36
CPSF2-205ENST00000556622 GGPS1O95749 300 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 SSBP05455 408 aaKnown RBP eCLIP6.58□□□□□ -1.36
CPSF2-205ENST00000556622 CYP3A4P08684 503 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 H2AFZP0C0S5 128 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 NR2F2P24468 414 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 CIITAP33076 1130 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 ETV3P41162 512 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 PRKCIP41743 596 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 PSMC4P43686 418 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 PMS1P54277 932 aaKnown RBP6.58□□□□□ -1.36
CPSF2-205ENST00000556622 IRX3P78415 501 aaPredicted RBP6.58□□□□□ -1.36
CPSF2-205ENST00000556622 LACTBP83111 547 aaPredicted RBP6.58□□□□□ -1.36
CPSF2-205ENST00000556622 BMT2Q1RMZ1 405 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 ZNF394Q53GI3 561 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 TREML2Q5T2D2 321 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 LRRC55Q6ZSA7 311 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 H2AFVQ71UI9 128 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 OTOP1Q7RTM1 612 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 THAP5Q7Z6K1 395 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 SRLQ86TD4 932 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 CDH24Q86UP0 819 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 GPBP1Q86WP2 473 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 ZSWIM9Q86XI8 627 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 SIAH1Q8IUQ4 282 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 CCDC50Q8IVM0 306 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 RHOT2Q8IXI1 618 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 FAM13CQ8NE31 585 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 RASGRP4Q8TDF6 673 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 ACER1Q8TDN7 264 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 AENQ8WTP8 325 aaKnown RBP6.58□□□□□ -1.36
CPSF2-205ENST00000556622 CHURC1Q8WUH1 139 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 TMEM174Q8WUU8 243 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 MAIP1Q8WWC4 291 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 ASB11Q8WXH4 323 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 LIN37Q96GY3 246 aaPredicted RBP6.58□□□□□ -1.36
CPSF2-205ENST00000556622 CAPZA3Q96KX2 299 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 PLIN2Q99541 437 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 P2RX7Q99572 595 aaKnown RBP6.58□□□□□ -1.36
CPSF2-205ENST00000556622 MMTAG2Q9BU76 263 aaKnown RBP6.58□□□□□ -1.36
CPSF2-205ENST00000556622 CNOT10Q9H9A5 744 aaKnown RBP6.58□□□□□ -1.36
CPSF2-205ENST00000556622 JMJD4Q9H9V9 463 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 PRDM7Q9NQW5 492 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 BLOC1S4Q9NUP1 217 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 GMIPQ9P107 970 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 ARHGAP20Q9P2F6 1191 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 LCMT1Q9UIC8 334 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 TTC7AQ9ULT0 858 aaPredicted RBP6.58□□□□□ -1.36
CPSF2-205ENST00000556622 TPX2Q9ULW0 747 aaKnown RBP6.58□□□□□ -1.36
CPSF2-205ENST00000556622 UTP11Q9Y3A2 253 aaKnown RBP6.58□□□□□ -1.36
CPSF2-205ENST00000556622 PCDHB14Q9Y5E9 798 aa6.58□□□□□ -1.36
CPSF2-205ENST00000556622 MYH8P13535 1937 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 GOLGA6L7A0A1B0GV03 622 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 PP2D1A8MPX8 630 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 PRR33A8MZF0 331 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 GCOM1H8Y6P7 765 aaPredicted RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 PGRMC1O00264 195 aaKnown RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 PODXLO00592 558 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 RGS13O14921 159 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 TLR3O15455 904 aaKnown RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 PLA2G6O60733 806 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 EYA4O95677 639 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 MYZAPP0CAP1 466 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 SRFP11831 508 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 FCER1AP12319 257 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 KRT13P13646 458 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 AKR1B1P15121 316 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 ATP5DP30049 168 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 SREBF1P36956 1147 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 NOP2P46087 812 aaKnown RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 GCLCP48506 637 aaPredicted RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 POLR2FP61218 127 aaKnown RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 ENPEPQ07075 957 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 RAD51AP2Q09MP3 1159 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 RAPGEF1Q13905 1077 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 ASTE1Q2TB18 679 aaPredicted RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 ZCWPW2Q504Y3 356 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 SLFN13Q68D06 897 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 FBXO46Q6PJ61 603 aaPredicted RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 YTHDF3Q7Z739 585 aaKnown RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 FAM160B2Q86V87 743 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 HOOK3Q86VS8 718 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 MFSD4AQ8N468 514 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 ANKRD13CQ8N6S4 541 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 UBL4BQ8N7F7 174 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 NOA1Q8NC60 698 aaKnown RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 CTNNBL1Q8WYA6 563 aaPredicted RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 NKD1Q969G9 470 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 DNAJC19Q96DA6 116 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 CCDC74BQ96LY2 380 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 CEP89Q96ST8 783 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 SH3GL2Q99962 352 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 DPH2Q9BQC3 489 aaPredicted RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 LSM14BQ9BX40 385 aaKnown RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 ANO3Q9BYT9 981 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 UBA5Q9GZZ9 404 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms