RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 SMARCAD1Q9H4L7 1026 aa5.22□□□□□ -1.57
ATXN3-237ENST00000556274 TNFRSF12AQ9NP84 129 aa5.22□□□□□ -1.57
ATXN3-237ENST00000556274 TBC1D22BQ9NU19 505 aa5.22□□□□□ -1.57
ATXN3-237ENST00000556274 SETD4Q9NVD3 440 aa5.22□□□□□ -1.57
ATXN3-237ENST00000556274 MARCH2Q9P0N8 246 aa5.22□□□□□ -1.57
ATXN3-237ENST00000556274 DDX25Q9UHL0 483 aaKnown RBP5.22□□□□□ -1.57
ATXN3-237ENST00000556274 ZNF215Q9UL58 517 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-237ENST00000556274 KIF3AQ9Y496 699 aa5.22□□□□□ -1.57
ATXN3-237ENST00000556274 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-237ENST00000556274 PCDHA2Q9Y5H9 948 aa5.22□□□□□ -1.57
ATXN3-237ENST00000556274 MICAL3Q7RTP6 2002 aa5.22□□□□□ -1.57
ATXN3-237ENST00000556274 GRIN2DO15399 1336 aa5.22□□□□□ -1.57
ATXN3-237ENST00000556274 STK36Q9NRP7 1315 aa5.22□□□□□ -1.57
ATXN3-237ENST00000556274 TDRD15B5MCY1 1934 aaKnown RBP5.21□□□□□ -1.57
ATXN3-237ENST00000556274 PTPRSQ13332 1948 aa5.21□□□□□ -1.57
ATXN3-237ENST00000556274 NID2Q14112 1375 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 TRBV23-1A0A0A0MS06 115 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 VPS37CA5D8V6 355 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-237ENST00000556274 C22orf46C9J442 243 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 ABLIM1O14639 778 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 MSH4O15457 936 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 TDP2O95551 362 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 FGBP02675 491 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 MMP1P03956 469 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 CYBBP04839 570 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 CYP3A4P08684 503 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 SMIM10L2AP0DMW4 78 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 SMIM10L2BP0DMW5 78 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 GNAT1P11488 350 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 CSF2RAP15509 400 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 KCNA2P16389 499 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 MCM7P33993 719 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 THPOP40225 353 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 BCL6P41182 706 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 HMGN5P82970 282 aaKnown RBP5.21□□□□□ -1.58
ATXN3-237ENST00000556274 RBM10P98175 930 aaKnown RBP5.21□□□□□ -1.58
ATXN3-237ENST00000556274 TMEM62Q0P6H9 643 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 BFSP2Q13515 415 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 SHHQ15465 462 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 TESK1Q15569 626 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 ZNF648Q5T619 568 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-237ENST00000556274 NCAPH2Q6IBW4 605 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 NFRKBQ6P4R8 1299 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 PAQR3Q6TCH7 311 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 CEP68Q76N32 757 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 MIER3Q7Z3K6 550 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 NEK8Q86SG6 692 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 TEX2Q8IWB9 1127 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 HSCBQ8IWL3 235 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 FAM126BQ8IXS8 530 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 DIS3L2Q8IYB7 885 aaKnown RBP5.21□□□□□ -1.58
ATXN3-237ENST00000556274 RPUSD2Q8IZ73 545 aaKnown RBP5.21□□□□□ -1.58
ATXN3-237ENST00000556274 METTL13Q8N6R0 699 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 FBXO15Q8NCQ5 510 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-237ENST00000556274 THAP3Q8WTV1 239 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-237ENST00000556274 TRAPPC12Q8WVT3 735 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 KAT2BQ92831 832 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 KCNN1Q92952 543 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 TNPO1Q92973 898 aaKnown RBP5.21□□□□□ -1.58
ATXN3-237ENST00000556274 TOX2Q96NM4 488 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 SENP7Q9BQF6 1050 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 DHRS4Q9BTZ2 278 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 FAM49AQ9H0Q0 323 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-237ENST00000556274 PIF1Q9H611 641 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 ZNF302Q9NR11 478 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 NRBP2Q9NSY0 501 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 ERAP1Q9NZ08 941 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.21□□□□□ -1.58
ATXN3-237ENST00000556274 GABBR1Q9UBS5 961 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 DBR1Q9UK59 544 aaKnown RBP5.21□□□□□ -1.58
ATXN3-237ENST00000556274 NOL7Q9UMY1 257 aaKnown RBP5.21□□□□□ -1.58
ATXN3-237ENST00000556274 NPFFR2Q9Y5X5 522 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 HTTP42858 3142 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 FRMPD4Q14CM0 1322 aa5.21□□□□□ -1.58
ATXN3-237ENST00000556274 SIP14410 1827 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 TANC1Q9C0D5 1861 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 A0A087WWV3 80 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 KIAA0355O15063 1070 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 CD4P01730 458 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 NTRK1P04629 796 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 DBHP09172 617 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 INSRRP14616 1297 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 ITGB8P26012 769 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 SUMO1P63165 101 aaKnown RBP5.2□□□□□ -1.58
ATXN3-237ENST00000556274 YBX1P67809 324 aaKnown RBP5.2□□□□□ -1.58
ATXN3-237ENST00000556274 NKX3-2P78367 333 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 SRSF3P84103 164 aaKnown RBP5.2□□□□□ -1.58
ATXN3-237ENST00000556274 SETQ01105 290 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-237ENST00000556274 ST3GAL1Q11201 340 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 PPFIA1Q13136 1202 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 ITGB3BPQ13352 177 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-237ENST00000556274 PPIGQ13427 754 aaKnown RBP eCLIP5.2□□□□□ -1.58
ATXN3-237ENST00000556274 LSAMPQ13449 338 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 NR1I3Q14994 352 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 ZRSR1Q15695 479 aaKnown RBP5.2□□□□□ -1.58
ATXN3-237ENST00000556274 CALCRLQ16602 461 aa5.2□□□□□ -1.58
ATXN3-237ENST00000556274 ZC3H12BQ5HYM0 836 aaKnown RBP5.2□□□□□ -1.58
ATXN3-237ENST00000556274 EARS2Q5JPH6 523 aaKnown RBP5.2□□□□□ -1.58
ATXN3-237ENST00000556274 MFSD5Q6N075 450 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms