RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 CCDC169A6NNP5 214 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 SPECC1L-ADORA2AF8WAN1 911 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 K7ERI5 159 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 K7ESF4 209 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 ARNTLO00327 626 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 CHADO15335 359 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 EPB41L2O43491 1005 aaKnown RBP6.35□□□□□ -1.39
PRKCH-220ENST00000556164 FOXD2O60548 495 aaPredicted RBP6.35□□□□□ -1.39
PRKCH-220ENST00000556164 HARSP12081 509 aaKnown RBP6.35□□□□□ -1.39
PRKCH-220ENST00000556164 FDPSP14324 419 aaKnown RBP6.35□□□□□ -1.39
PRKCH-220ENST00000556164 RPA1P27694 616 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 CNR2P34972 360 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 GRM5P41594 1212 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 EPHA5P54756 1037 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 TRIM29Q14134 588 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 SF3A2Q15428 464 aaKnown RBP6.35□□□□□ -1.39
PRKCH-220ENST00000556164 CCDC6Q16204 474 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 XKR4Q5GH76 650 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 DGKKQ5KSL6 1271 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 LCE2DQ5TA82 110 aaPredicted RBP6.35□□□□□ -1.39
PRKCH-220ENST00000556164 C1orf228Q6PIY5 440 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 ALKAL1Q6UXT8 129 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 NECAB1Q8N987 351 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 APPL2Q8NEU8 664 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 SHKBP1Q8TBC3 707 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 KIFAP3Q92845 792 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 E2F7Q96AV8 911 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 C18orf25Q96B23 403 aaPredicted RBP6.35□□□□□ -1.39
PRKCH-220ENST00000556164 RSPRY1Q96DX4 576 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 MSANTD3Q96H12 275 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 SUSD3Q96L08 255 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 ZMAT2Q96NC0 199 aaKnown RBP6.35□□□□□ -1.39
PRKCH-220ENST00000556164 TBC1D32Q96NH3 1257 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 ACAP3Q96P50 834 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 PGLYRP2Q96PD5 576 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 ACO2Q99798 780 aaKnown RBP6.35□□□□□ -1.39
PRKCH-220ENST00000556164 TCHPQ9BT92 498 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 SPON2Q9BUD6 331 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 C2orf49Q9BVC5 232 aaPredicted RBP6.35□□□□□ -1.39
PRKCH-220ENST00000556164 MRPL4Q9BYD3 311 aaKnown RBP6.35□□□□□ -1.39
PRKCH-220ENST00000556164 GPR88Q9GZN0 384 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 BHMT2Q9H2M3 363 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 C8orf33Q9H7E9 229 aaPredicted RBP6.35□□□□□ -1.39
PRKCH-220ENST00000556164 TRPV4Q9HBA0 871 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 C2orf42Q9NWW7 574 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 FAM8A1Q9UBU6 413 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 YIPF1Q9Y548 306 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 THADAQ6YHU6 1953 aa6.35□□□□□ -1.39
PRKCH-220ENST00000556164 CHD8Q9HCK8 2581 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 SCN1AP35498 2009 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 CFAP47Q6ZTR5 3102 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 MYBPHLA2RUH7 354 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 FAM221BA6H8Z2 402 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 AXIN1O15169 862 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 PAPSS2O95340 614 aaPredicted RBP6.34□□□□□ -1.39
PRKCH-220ENST00000556164 PDGFAP04085 211 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 OR4Q2P0C623 313 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 OR52Z1P0C646 297 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 HOXB3P14651 431 aaPredicted RBP6.34□□□□□ -1.39
PRKCH-220ENST00000556164 KCNE1P15382 129 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 PCSK2P16519 638 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 PMLP29590 882 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 MARCKSP29966 332 aaPredicted RBP6.34□□□□□ -1.39
PRKCH-220ENST00000556164 HOXC13P31276 330 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 RPL9P32969 192 aaKnown RBP6.34□□□□□ -1.39
PRKCH-220ENST00000556164 NOS2P35228 1153 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 ETFBP38117 255 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 CCT6AP40227 531 aaKnown RBP6.34□□□□□ -1.39
PRKCH-220ENST00000556164 NPTX2P47972 431 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 NASPP49321 788 aaPredicted RBP6.34□□□□□ -1.39
PRKCH-220ENST00000556164 MMP16P51512 607 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 EPHB3P54753 998 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 MLLT6P55198 1093 aaPredicted RBP6.34□□□□□ -1.39
PRKCH-220ENST00000556164 PEX3P56589 373 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 FCHO2Q0JRZ9 810 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 DMP1Q13316 513 aaPredicted RBP6.34□□□□□ -1.39
PRKCH-220ENST00000556164 PLD1Q13393 1074 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 PWP1Q13610 501 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 HLTFQ14527 1009 aaKnown RBP eCLIP6.34□□□□□ -1.39
PRKCH-220ENST00000556164 PON2Q15165 354 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 ANKRD1Q15327 319 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 ZNF174Q15697 407 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 WDR44Q5JSH3 913 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 ZFYVE27Q5T4F4 411 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 STXBP5Q5T5C0 1151 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 N4BP2L1Q5TBK1 243 aaPredicted RBP6.34□□□□□ -1.39
PRKCH-220ENST00000556164 HAUS3Q68CZ6 603 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 TXNDC11Q6PKC3 985 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 MPZL3Q6UWV2 235 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 HAUS6Q7Z4H7 955 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 RALGPS2Q86X27 583 aaPredicted RBP6.34□□□□□ -1.39
PRKCH-220ENST00000556164 TMC8Q8IU68 726 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 SYNPOQ8N3V7 929 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 NSUN7Q8NE18 718 aaKnown RBP6.34□□□□□ -1.39
PRKCH-220ENST00000556164 ZFYVE19Q96K21 471 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 SCYL1Q96KG9 808 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 KCNK17Q96T54 332 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 RSRP1Q9BUV0 290 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 TARS2Q9BW92 718 aaKnown RBP6.34□□□□□ -1.39
PRKCH-220ENST00000556164 TSPAN10Q9H1Z9 355 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms