RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 UBXN6Q9BZV1 441 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 ZNF518BQ9C0D4 1074 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 MTMR12Q9C0I1 747 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 AP5M1Q9H0R1 490 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 WNT8AQ9H1J5 351 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 ALG2Q9H553 416 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 VIPAS39Q9H9C1 493 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 CYP3A43Q9HB55 503 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 ACP6Q9NPH0 428 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 RBM12Q9NTZ6 932 aaKnown RBP8.84□□□□□ -0.99
ATXN3-235ENST00000556082 SETD4Q9NVD3 440 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 DNAAF2Q9NVR5 837 aaKnown RBP8.84□□□□□ -0.99
ATXN3-235ENST00000556082 FLRT1Q9NZU1 646 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 LCMT1Q9UIC8 334 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 PLXNA1Q9UIW2 1896 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 NOD1Q9Y239 953 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 DERAQ9Y315 318 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 C2CD2Q9Y426 696 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 PCDHGA11Q9Y5H2 935 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 MCM3APO60318 1980 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 A0A0U1RQG5 324 aaPredicted RBP8.83□□□□□ -1
ATXN3-235ENST00000556082 CCDC66A2RUB6 948 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 LACTBL1A8MY62 500 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 TMEM229AB2RXF0 380 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 C2CD2LO14523 706 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 MEFVO15553 781 aaPredicted RBP8.83□□□□□ -1
ATXN3-235ENST00000556082 CA12O43570 354 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 CEP104O60308 925 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 GPR32O75388 356 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 VTNP04004 478 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 TMEM191BP0C7N4 346 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 HSPA6P17066 643 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 AXLP30530 894 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 HOXA11P31270 313 aaPredicted RBP8.83□□□□□ -1
ATXN3-235ENST00000556082 CDH5P33151 784 aaPredicted RBP8.83□□□□□ -1
ATXN3-235ENST00000556082 SLC1A1P43005 524 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 PEX5P50542 639 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 PTP4A2Q12974 167 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 TMEM132AQ24JP5 1023 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 SLC10A6Q3KNW5 377 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 PRAMEF19Q5SWL8 479 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 LIN9Q5TKA1 542 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 SPOPLQ6IQ16 392 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 TMEM270Q6UE05 265 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 TLK2Q86UE8 772 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 IFT20Q8IY31 132 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 KRT222Q8N1A0 295 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 ZNF653Q96CK0 615 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 FAM84AQ96KN4 292 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 ACAP3Q96P50 834 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 PSMB7Q99436 277 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 ADPGKQ9BRR6 497 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 NUP85Q9BW27 656 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 KATNAL1Q9BW62 490 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 BCO2Q9BYV7 579 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 SLITRK6Q9H5Y7 841 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.83□□□□□ -1
ATXN3-235ENST00000556082 GDF3Q9NR23 364 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 STIM2Q9P246 746 aa8.83□□□□□ -1
ATXN3-235ENST00000556082 CNOT8Q9UFF9 292 aaKnown RBP8.83□□□□□ -1
ATXN3-235ENST00000556082 PACSIN2Q9UNF0 486 aaPredicted RBP8.83□□□□□ -1
ATXN3-235ENST00000556082 SHISA8B8ZZ34 492 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 TNPO2O14787 897 aaKnown RBP8.82□□□□□ -1
ATXN3-235ENST00000556082 ATXN7O15265 892 aaPredicted RBP8.82□□□□□ -1
ATXN3-235ENST00000556082 DUSP11O75319 330 aaKnown RBP8.82□□□□□ -1
ATXN3-235ENST00000556082 ERLIN2O94905 339 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 PAEPP09466 180 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 CXCL8P10145 99 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 GNAT1P11488 350 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 DARSP14868 501 aaKnown RBP8.82□□□□□ -1
ATXN3-235ENST00000556082 MMP8P22894 467 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 EIF4BP23588 611 aaKnown RBP8.82□□□□□ -1
ATXN3-235ENST00000556082 GNA15P30679 374 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 CYP2C19P33261 490 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 CTNNA1P35221 906 aaKnown RBP8.82□□□□□ -1
ATXN3-235ENST00000556082 ASPAP45381 313 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 NSFP46459 744 aaKnown RBP8.82□□□□□ -1
ATXN3-235ENST00000556082 NOMO3P69849 1222 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 RBP5P82980 135 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 CTBSQ01459 385 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 ZNF699Q32M78 642 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 ARSJQ5FYB0 599 aaPredicted RBP8.82□□□□□ -1
ATXN3-235ENST00000556082 PLEKHA7Q6IQ23 1121 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 C8orf74Q6P047 294 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 C1orf229Q6ZS94 237 aaPredicted RBP8.82□□□□□ -1
ATXN3-235ENST00000556082 MON1BQ7L1V2 547 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 ZNF295-AS1Q8N0V1 137 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 CEP120Q8N960 986 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 ZNF564Q8TBZ8 553 aaPredicted RBP8.82□□□□□ -1
ATXN3-235ENST00000556082 ZNF606Q8WXB4 792 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 ZSWIM1Q9BR11 485 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 LHX5Q9H2C1 402 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 GOLPH3Q9H4A6 298 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 MRPL47Q9HD33 250 aaKnown RBP8.82□□□□□ -1
ATXN3-235ENST00000556082 CISHQ9NSE2 258 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 DMGDHQ9UI17 866 aaKnown RBP8.82□□□□□ -1
ATXN3-235ENST00000556082 SIX4Q9UIU6 781 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 ITGA11Q9UKX5 1188 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 KIAA1257Q9ULG3 409 aa8.82□□□□□ -1
ATXN3-235ENST00000556082 PCDHA3Q9Y5H8 950 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms