RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 EFHBQ8N7U6 833 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 SPPL2BQ8TCT7 592 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 SLC22A17Q8WUG5 538 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 HDAC7Q8WUI4 952 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 FUBP3Q96I24 572 aaKnown RBP eCLIP15.21■□□□□ 0.03
CHD8-208ENST00000555301 SPAG5Q96R06 1193 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 TWNKQ96RR1 684 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 PKMYT1Q99640 499 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 EDEM3Q9BZQ6 932 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 ELOVL4Q9GZR5 314 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 DPEP3Q9H4B8 488 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 PLEKHA4Q9H4M7 779 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 IGFLR1Q9H665 355 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 CRTAC1Q9NQ79 661 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 CEP72Q9P209 647 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 HSFX1Q9UBD0 423 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 HMGXB4Q9UGU5 601 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 GTF3C4Q9UKN8 822 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 KIAA1257Q9ULG3 409 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 CNTN6Q9UQ52 1028 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 HCFC2Q9Y5Z7 792 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 COL4A4P53420 1690 aaPredicted RBP15.21■□□□□ 0.03
CHD8-208ENST00000555301 ITIH6Q6UXX5 1313 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 MTMR11A4FU01 709 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 EPHB6O15197 1021 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 ATP2C2O75185 946 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 PAEPP09466 180 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 KRT5P13647 590 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 RAD23BP54727 409 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 ADCY1Q08828 1119 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 DRAP1Q14919 205 aaPredicted RBP15.2■□□□□ 0.02
CHD8-208ENST00000555301 CFAP221Q4G0U5 840 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 MDH1BQ5I0G3 518 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 RNF19BQ6ZMZ0 732 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 RTL10Q7L3V2 364 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 SPATA2LQ8IUW3 424 aaPredicted RBP15.2■□□□□ 0.02
CHD8-208ENST00000555301 FMNL3Q8IVF7 1028 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 SLC4A11Q8NBS3 891 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 RBBP8NLQ8NC74 664 aaPredicted RBP15.2■□□□□ 0.02
CHD8-208ENST00000555301 KREMEN2Q8NCW0 462 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 CASP10Q92851 521 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 HEXIM2Q96MH2 286 aaKnown RBP15.2■□□□□ 0.02
CHD8-208ENST00000555301 PGLYRP2Q96PD5 576 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 ABCB6Q9NP58 842 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 FBXW11Q9UKB1 542 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 PCDHB5Q9Y5E4 795 aa15.2■□□□□ 0.02
CHD8-208ENST00000555301 FOXN3O00409 490 aaPredicted RBP15.19■□□□□ 0.02
CHD8-208ENST00000555301 USP8P40818 1118 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 ZNF132P52740 706 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 CYP27A1Q02318 531 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 ORC1Q13415 861 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 KCNC3Q14003 757 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 PTPN21Q16825 1174 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 LIN9Q5TKA1 542 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 SPECC1LQ69YQ0 1117 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 TMEM184AQ6ZMB5 413 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 CCDC149Q6ZUS6 474 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 TCEAL8Q8IYN2 117 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 MYLPFQ96A32 169 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 PCED1BQ96HM7 432 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 CYP4F11Q9HBI6 524 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 NLRC4Q9NPP4 1024 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 TMLHEQ9NVH6 421 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 DZANK1Q9NVP4 752 aa15.19■□□□□ 0.02
CHD8-208ENST00000555301 ABI2Q9NYB9 513 aaPredicted RBP15.19■□□□□ 0.02
CHD8-208ENST00000555301 AJAP1Q9UKB5 411 aaPredicted RBP15.19■□□□□ 0.02
CHD8-208ENST00000555301 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.19■□□□□ 0.02
CHD8-208ENST00000555301 ATP8B3O60423 1300 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 GOLGA6L3A6NEY3 463 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 F8VZ95 297 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 PRRG1O14668 218 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 AP5Z1O43299 807 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 VDRP11473 427 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 CD19P15391 556 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 EPCAMP16422 314 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 GTF2F1P35269 517 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHD8-208ENST00000555301 STAT1P42224 750 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 TUFMP49411 452 aaKnown RBP15.18■□□□□ 0.02
CHD8-208ENST00000555301 JAM2P57087 298 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 BPIFB4P59827 614 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 PTK2Q05397 1052 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 ADAM15Q13444 863 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 STILQ15468 1287 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 SGO2Q562F6 1265 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 LLGL2Q6P1M3 1020 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 VSTM4Q8IW00 320 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 FAM71AQ8IYT1 594 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 C12orf29Q8N999 325 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 ATAD1Q8NBU5 361 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 CYFIP2Q96F07 1278 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 MRFAP1L1Q96HT8 127 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 GPR88Q9GZN0 384 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 MAN1C1Q9NR34 630 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 MYO6Q9UM54 1294 aa15.18■□□□□ 0.02
CHD8-208ENST00000555301 A0A1W2PQJ5 194 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 SPDYE4A6NLX3 237 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 RNF225M0QZC1 329 aaPredicted RBP15.17■□□□□ 0.02
CHD8-208ENST00000555301 C8AP07357 584 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 SPATA31D3P0C874 917 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 MAGEA11P43364 429 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms