RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 CLUHO75153 1309 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 EPG5Q9HCE0 2579 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 NLRC5Q86WI3 1866 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 MYH7P12883 1935 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 KIAA1217Q5T5P2 1943 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 DDX39AO00148 427 aaKnown RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 INPPL1O15357 1258 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 DNAJA2O60884 412 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 RFPL2O75678 378 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 DDAH1O94760 285 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 GLUD1P00367 558 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 HPXP02790 462 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 SSBP05455 408 aaKnown RBP eCLIP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 URODP06132 367 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 TRHRP34981 398 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 SLC11A1P49279 550 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 RAB27AP51159 221 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 GPC3P51654 580 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 CLCN3P51790 818 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 AK2P54819 239 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 PFKPQ01813 784 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 DMWDQ09019 674 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 SNW1Q13573 536 aaKnown RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 HTR4Q13639 388 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 COL9A2Q14055 689 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 ZBTB41Q5SVQ8 909 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 LCNL1Q6ZST4 164 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 NIPA1Q7RTP0 329 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 TRMT1LQ7Z2T5 733 aaKnown RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 CCDC60Q8IWA6 550 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 SMAP1Q8IYB5 467 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 SRBD1Q8N5C6 995 aaKnown RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 CELF5Q8N6W0 485 aaKnown RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 LINC01465Q8N7H1 131 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 FAM13CQ8NE31 585 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 NCOA7Q8NI08 942 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 ABHD4Q8TB40 342 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 GATAD2BQ8WXI9 593 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 DDX1Q92499 740 aaKnown RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 SMG7Q92540 1137 aaKnown RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 PHKBQ93100 1093 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 CLDN23Q96B33 292 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 ZNF707Q96C28 371 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 PGBD4Q96DM1 585 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 CCDC120Q96HB5 630 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 FAM167AQ96KS9 214 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 SCLT1Q96NL6 688 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 FAM193BQ96PV7 902 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 RPS6KC1Q96S38 1066 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 TMEM175Q9BSA9 504 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 VN1R3Q9BXE9 311 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 GCOM2Q9BZD3 368 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 INO80BQ9C086 356 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-229ENST00000554672 NT5C3AQ9H0P0 336 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 LY9Q9HBG7 655 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 TBC1D22BQ9NU19 505 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 ZDHHC7Q9NXF8 308 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 ANGPTL2Q9UKU9 493 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 RAB23Q9ULC3 237 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 PCDHA10Q9Y5I2 948 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 NUMBLQ9Y6R0 609 aa5.42□□□□□ -1.54
ATXN3-229ENST00000554672 DNAH14Q0VDD8 3507 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-229ENST00000554672 CHURC1-FNTBB4DL54 471 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 E7EWF7 191 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 IPO5O00410 1097 aaKnown RBP5.41□□□□□ -1.54
ATXN3-229ENST00000554672 NRP1O14786 923 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 TEX28O15482 410 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 FOXD2O60548 495 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-229ENST00000554672 LRP3O75074 770 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 DDHD2O94830 711 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 PLEKHA8P1O95397 391 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 SOD2P04179 222 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 RETP07949 1114 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 CYP21A2P08686 494 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 CALM1P0DP23 149 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 CALM2P0DP24 149 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 CALM3P0DP25 149 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 FGFR4P22455 802 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 SFPQP23246 707 aaKnown RBP eCLIP5.41□□□□□ -1.54
ATXN3-229ENST00000554672 RPS9P46781 194 aaKnown RBP5.41□□□□□ -1.54
ATXN3-229ENST00000554672 HDAC1Q13547 482 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-229ENST00000554672 UBXN2BQ14CS0 331 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 MLF2Q15773 248 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-229ENST00000554672 LONRF3Q496Y0 759 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 TWF2Q6IBS0 349 aaKnown RBP5.41□□□□□ -1.54
ATXN3-229ENST00000554672 TSPYL5Q86VY4 417 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-229ENST00000554672 PLA2G4DQ86XP0 818 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 ZNF280BQ86YH2 543 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 GPR65Q8IYL9 337 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 SLFN12Q8IYM2 578 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 ZNF654Q8IZM8 581 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 LRRC71Q8N4P6 559 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 BAHD1Q8TBE0 780 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-229ENST00000554672 URGCPQ8TCY9 931 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 LPPQ93052 612 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 ZNF668Q96K58 619 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-229ENST00000554672 TMEM74Q96NL1 305 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 MTA3Q9BTC8 594 aa5.41□□□□□ -1.54
ATXN3-229ENST00000554672 RPP25Q9BUL9 199 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms