RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ABHD2P08910 425 aa10□□□□□ -0.81
SIX4-202ENST00000554079 DLDP09622 509 aaKnown RBP10□□□□□ -0.81
SIX4-202ENST00000554079 FAM58BPP0C7Q3 252 aa10□□□□□ -0.81
SIX4-202ENST00000554079 CA4P22748 312 aa10□□□□□ -0.81
SIX4-202ENST00000554079 IVDP26440 423 aa10□□□□□ -0.81
SIX4-202ENST00000554079 KCNJ1P48048 391 aa10□□□□□ -0.81
SIX4-202ENST00000554079 IRX4P78413 519 aa10□□□□□ -0.81
SIX4-202ENST00000554079 IFITM2Q01629 132 aa10□□□□□ -0.81
SIX4-202ENST00000554079 SEC23AQ15436 765 aa10□□□□□ -0.81
SIX4-202ENST00000554079 PKN2Q16513 984 aaKnown RBP10□□□□□ -0.81
SIX4-202ENST00000554079 CYP2A13Q16696 494 aa10□□□□□ -0.81
SIX4-202ENST00000554079 GRAMD1BQ3KR37 738 aa10□□□□□ -0.81
SIX4-202ENST00000554079 ITPRIPL1Q6GPH6 555 aa10□□□□□ -0.81
SIX4-202ENST00000554079 IYDQ6PHW0 289 aa10□□□□□ -0.81
SIX4-202ENST00000554079 RFPL4BQ6ZWI9 263 aa10□□□□□ -0.81
SIX4-202ENST00000554079 CYP2U1Q7Z449 544 aa10□□□□□ -0.81
SIX4-202ENST00000554079 TDRPQ86YL5 185 aa10□□□□□ -0.81
SIX4-202ENST00000554079 MMAAQ8IVH4 418 aaKnown RBP10□□□□□ -0.81
SIX4-202ENST00000554079 C4orf33Q8N1A6 199 aa10□□□□□ -0.81
SIX4-202ENST00000554079 ELMOD1Q8N336 334 aa10□□□□□ -0.81
SIX4-202ENST00000554079 LNX1Q8TBB1 728 aaPredicted RBP10□□□□□ -0.81
SIX4-202ENST00000554079 XAGE3Q8WTP9 111 aa10□□□□□ -0.81
SIX4-202ENST00000554079 SLCO2A1Q92959 643 aa10□□□□□ -0.81
SIX4-202ENST00000554079 ERLEC1Q96DZ1 483 aa10□□□□□ -0.81
SIX4-202ENST00000554079 RBM15Q96T37 977 aaKnown RBP eCLIP10□□□□□ -0.81
SIX4-202ENST00000554079 GPRC5DQ9NZD1 345 aa10□□□□□ -0.81
SIX4-202ENST00000554079 STK17AQ9UEE5 414 aa10□□□□□ -0.81
SIX4-202ENST00000554079 IFT52Q9Y366 437 aa10□□□□□ -0.81
SIX4-202ENST00000554079 PCDHGA11Q9Y5H2 935 aa10□□□□□ -0.81
SIX4-202ENST00000554079 AP4B1Q9Y6B7 739 aa10□□□□□ -0.81
SIX4-202ENST00000554079 V9GY48 417 aaPredicted RBP10□□□□□ -0.81
SIX4-202ENST00000554079 BAZ2AQ9UIF9 1905 aaKnown RBP10□□□□□ -0.81
SIX4-202ENST00000554079 C10orf71Q711Q0 1435 aa10□□□□□ -0.81
SIX4-202ENST00000554079 C2orf71A6NGG8 1288 aa10□□□□□ -0.81
SIX4-202ENST00000554079 FOXD2O60548 495 aaPredicted RBP10□□□□□ -0.81
SIX4-202ENST00000554079 BBOX1O75936 387 aa10□□□□□ -0.81
SIX4-202ENST00000554079 TGDSO95455 350 aa10□□□□□ -0.81
SIX4-202ENST00000554079 CHEK2O96017 543 aa10□□□□□ -0.81
SIX4-202ENST00000554079 S100BP04271 92 aaPredicted RBP10□□□□□ -0.81
SIX4-202ENST00000554079 ENO2P09104 434 aaPredicted RBP10□□□□□ -0.81
SIX4-202ENST00000554079 TMEM253P0C7T8 217 aa10□□□□□ -0.81
SIX4-202ENST00000554079 SRGAP2CP0DJJ0 459 aa10□□□□□ -0.81
SIX4-202ENST00000554079 SRGAP2BP0DMP2 458 aa10□□□□□ -0.81
SIX4-202ENST00000554079 ACTN1P12814 892 aa10□□□□□ -0.81
SIX4-202ENST00000554079 ITIH2P19823 946 aa10□□□□□ -0.81
SIX4-202ENST00000554079 ENPP1P22413 925 aa10□□□□□ -0.81
SIX4-202ENST00000554079 CPOXP36551 454 aa10□□□□□ -0.81
SIX4-202ENST00000554079 MARCKSL1P49006 195 aa10□□□□□ -0.81
SIX4-202ENST00000554079 AP3M2P53677 418 aa10□□□□□ -0.81
SIX4-202ENST00000554079 MARSP56192 900 aaKnown RBP10□□□□□ -0.81
SIX4-202ENST00000554079 ZNF200P98182 395 aaPredicted RBP10□□□□□ -0.81
SIX4-202ENST00000554079 GPR162Q16538 588 aa10□□□□□ -0.81
SIX4-202ENST00000554079 TIGD2Q4W5G0 525 aa10□□□□□ -0.81
SIX4-202ENST00000554079 MIER3Q7Z3K6 550 aa10□□□□□ -0.81
SIX4-202ENST00000554079 CCDC105Q8IYK2 499 aa10□□□□□ -0.81
SIX4-202ENST00000554079 LSMEM2Q8N112 164 aa10□□□□□ -0.81
SIX4-202ENST00000554079 GALNT4Q8N4A0 578 aa10□□□□□ -0.81
SIX4-202ENST00000554079 ATP6V0D2Q8N8Y2 350 aa10□□□□□ -0.81
SIX4-202ENST00000554079 SLC30A5Q8TAD4 765 aa10□□□□□ -0.81
SIX4-202ENST00000554079 JADE3Q92613 823 aa10□□□□□ -0.81
SIX4-202ENST00000554079 KRT35Q92764 455 aa10□□□□□ -0.81
SIX4-202ENST00000554079 CNBD2Q96M20 576 aa10□□□□□ -0.81
SIX4-202ENST00000554079 DCLK3Q9C098 648 aa10□□□□□ -0.81
SIX4-202ENST00000554079 B3GNT4Q9C0J1 378 aa10□□□□□ -0.81
SIX4-202ENST00000554079 CDH19Q9H159 772 aa10□□□□□ -0.81
SIX4-202ENST00000554079 C1orf21Q9H246 121 aa10□□□□□ -0.81
SIX4-202ENST00000554079 LRRC4BQ9NT99 713 aa10□□□□□ -0.81
SIX4-202ENST00000554079 SACM1LQ9NTJ5 587 aa10□□□□□ -0.81
SIX4-202ENST00000554079 SENP1Q9P0U3 644 aa10□□□□□ -0.81
SIX4-202ENST00000554079 CRNNQ9UBG3 495 aaPredicted RBP10□□□□□ -0.81
SIX4-202ENST00000554079 TAGLN3Q9UI15 199 aa10□□□□□ -0.81
SIX4-202ENST00000554079 POU2F3Q9UKI9 436 aa10□□□□□ -0.81
SIX4-202ENST00000554079 DNAJC16Q9Y2G8 782 aa10□□□□□ -0.81
SIX4-202ENST00000554079 TANC1Q9C0D5 1861 aa10□□□□□ -0.81
SIX4-202ENST00000554079 SF3B1O75533 1304 aaKnown RBP eCLIP10□□□□□ -0.811e-7■■■■■ 172.3
SIX4-202ENST00000554079 FAM205AQ6ZU69 1335 aa10□□□□□ -0.81
SIX4-202ENST00000554079 DCAF8L1A6NGE4 600 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 RGS13O14921 159 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 CIAO1O76071 339 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 ESRRBO95718 433 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 RAG1P15918 1043 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 PRKACBP22694 351 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 ALDH1A3P47895 512 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 CTBSQ01459 385 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 CRY1Q16526 586 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 PARP10Q53GL7 1025 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 BTBD8Q5XKL5 378 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 NEK10Q6ZWH5 1172 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 ALYREFQ86V81 257 aaKnown RBP9.99□□□□□ -0.81
SIX4-202ENST00000554079 GPR180Q86V85 440 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 RELL1Q8IUW5 271 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 CPNE9Q8IYJ1 553 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 ZNF280CQ8ND82 737 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 HCAR2Q8TDS4 363 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 PSPC1Q8WXF1 523 aaKnown RBP9.99□□□□□ -0.81
SIX4-202ENST00000554079 HSPH1Q92598 858 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 ARHGEF26Q96DR7 871 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 PWWP2AQ96N64 755 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 STRBPQ96SI9 672 aaKnown RBP9.99□□□□□ -0.81
SIX4-202ENST00000554079 TSG101Q99816 390 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms