RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 PSMD6Q15008 389 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 POLD3Q15054 466 aaPredicted RBP12.77□□□□□ -0.36
NR4A1-215ENST00000550557 ZPBP2Q6X784 338 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 USP33Q8TEY7 942 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 CHST12Q9NRB3 414 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 OLA1Q9NTK5 396 aaKnown RBP12.77□□□□□ -0.36
NR4A1-215ENST00000550557 ZNF446Q9NWS9 450 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 SRRDQ9UH36 339 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 ITGA11Q9UKX5 1188 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 A0A0G2JLL6 359 aaPredicted RBP12.77□□□□□ -0.36
NR4A1-215ENST00000550557 TRIM66O15016 1216 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 SLITRK3O94933 977 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 PARNO95453 639 aaKnown RBP12.77□□□□□ -0.36
NR4A1-215ENST00000550557 MT-ND3P03897 115 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 SELPP16109 830 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 ORC1Q13415 861 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 BTNL9Q6UXG8 535 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 ZNF720Q7Z2F6 126 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 PRRT2Q7Z6L0 340 aaPredicted RBP12.77□□□□□ -0.36
NR4A1-215ENST00000550557 USP38Q8NB14 1042 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 CCDC197Q8NCU1 140 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 MORC4Q8TE76 937 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 MID2Q9UJV3 735 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 GRID2IPA4D2P6 1211 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 ADCY6O43306 1168 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 ADH1AP07327 375 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 NOMO2Q5JPE7 1267 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 SH2D4BQ5SQS7 431 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 CCNI2Q6ZMN8 369 aaPredicted RBP12.77□□□□□ -0.37
NR4A1-215ENST00000550557 PLPPR4Q7Z2D5 763 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 MIPOL1Q8TD10 442 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 WDCPQ9H6R7 721 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 CNOT10Q9H9A5 744 aaKnown RBP12.77□□□□□ -0.37
NR4A1-215ENST00000550557 SLC25A13Q9UJS0 675 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 ATP8A1Q9Y2Q0 1164 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 C3orf70A6NLC5 250 aaPredicted RBP12.77□□□□□ -0.37
NR4A1-215ENST00000550557 SNX2O60749 519 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 RECQL4O94761 1208 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 SLC9A1P19634 815 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 BCAT1P54687 386 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 FIGNQ5HY92 759 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 SPIRE2Q8WWL2 714 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 LRRC1Q9BTT6 524 aa12.77□□□□□ -0.37
NR4A1-215ENST00000550557 ACTR5Q9H9F9 607 aaPredicted RBP12.77□□□□□ -0.37
NR4A1-215ENST00000550557 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.77□□□□□ -0.37
NR4A1-215ENST00000550557 UXTQ9UBK9 157 aaPredicted RBP12.77□□□□□ -0.37
NR4A1-215ENST00000550557 AFF4Q9UHB7 1163 aaKnown RBP12.77□□□□□ -0.37
NR4A1-215ENST00000550557 RPTORQ8N122 1335 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 CCDC188H7C350 402 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 M0QYT0 321 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 PLA2G6O60733 806 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 ASS1P00966 412 aaKnown RBP12.76□□□□□ -0.37
NR4A1-215ENST00000550557 YBX3P16989 372 aaKnown RBP eCLIP12.76□□□□□ -0.37
NR4A1-215ENST00000550557 EPHB2P29323 1055 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 TLR8Q9NR97 1041 aaKnown RBP12.76□□□□□ -0.37
NR4A1-215ENST00000550557 SLC30A1Q9Y6M5 507 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 UNCXA6NJT0 531 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 PODXLO00592 558 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 GPD1P21695 349 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 MAP3K7CLP57077 242 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 CEP120Q8N960 986 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 CYP3A43Q9HB55 503 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 SMPD4Q9NXE4 827 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 ST3GAL5Q9UNP4 418 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 NOVA2Q9UNW9 492 aaKnown RBP12.76□□□□□ -0.37
NR4A1-215ENST00000550557 CHEK2O96017 543 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 F9P00740 461 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 MLH1P40692 756 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 KLK7P49862 253 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 CREMQ03060 361 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 PIGHQ14442 188 aaPredicted RBP12.76□□□□□ -0.37
NR4A1-215ENST00000550557 PREPLQ4J6C6 727 aaPredicted RBP12.76□□□□□ -0.37
NR4A1-215ENST00000550557 EPC2Q52LR7 807 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 CARNMT1Q8N4J0 409 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 MAML3Q96JK9 1138 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 NUF2Q9BZD4 464 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 PLAGL2Q9UPG8 496 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 MRPS23Q9Y3D9 190 aaKnown RBP12.76□□□□□ -0.37
NR4A1-215ENST00000550557 UBIAD1Q9Y5Z9 338 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 SF3B1O75533 1304 aaKnown RBP eCLIP12.76□□□□□ -0.37
NR4A1-215ENST00000550557 ZMYM2Q9UBW7 1377 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 SPTLC1O15269 473 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 SLC1A1P43005 524 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 JADE1Q6IE81 842 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 CENPPQ6IPU0 288 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 HELQQ8TDG4 1101 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 CDK5RAP1Q96SZ6 601 aaKnown RBP12.76□□□□□ -0.37
NR4A1-215ENST00000550557 EGFL8Q99944 293 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 WNT8AQ9H1J5 351 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 FBXO44Q9H4M3 255 aa12.76□□□□□ -0.37
NR4A1-215ENST00000550557 TTC7AQ9ULT0 858 aaPredicted RBP12.76□□□□□ -0.37
NR4A1-215ENST00000550557 SPATA31C2B4DYI2 1134 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 CFAP99D6REC4 459 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 GJB1P08034 283 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 CRYBB1P53674 252 aaPredicted RBP12.75□□□□□ -0.37
NR4A1-215ENST00000550557 MYL6P60660 151 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 ZNF211Q13398 564 aaPredicted RBP12.75□□□□□ -0.37
NR4A1-215ENST00000550557 SLC18A3Q16572 532 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 MTHFD1LQ6UB35 978 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 ZNF677Q86XU0 584 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms