RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 CDH7Q9ULB5 785 aa27.73■■■□□ 2.03
CPSF6-205ENST00000550075 A8MXQ7 604 aa27.72■■■□□ 2.03
CPSF6-205ENST00000550075 PDGFRBP09619 1106 aa27.72■■■□□ 2.03
CPSF6-205ENST00000550075 HAPLN1P10915 354 aaPredicted RBP27.72■■■□□ 2.03
CPSF6-205ENST00000550075 TRIM21P19474 475 aaKnown RBP27.72■■■□□ 2.03
CPSF6-205ENST00000550075 PSMC1P62191 440 aaKnown RBP27.72■■■□□ 2.03
CPSF6-205ENST00000550075 PTPN21Q16825 1174 aa27.72■■■□□ 2.03
CPSF6-205ENST00000550075 FBXL13Q8NEE6 735 aa27.72■■■□□ 2.03
CPSF6-205ENST00000550075 PKMYT1Q99640 499 aa27.72■■■□□ 2.03
CPSF6-205ENST00000550075 TMLHEQ9NVH6 421 aa27.72■■■□□ 2.03
CPSF6-205ENST00000550075 PI4K2BG5E9Z4 385 aa27.71■■■□□ 2.03
CPSF6-205ENST00000550075 N4BP1O75113 896 aaKnown RBP27.71■■■□□ 2.03
CPSF6-205ENST00000550075 RPL10AP62906 217 aaKnown RBP27.71■■■□□ 2.03
CPSF6-205ENST00000550075 TAF12Q16514 161 aa27.71■■■□□ 2.03
CPSF6-205ENST00000550075 CFAP221Q4G0U5 840 aa27.71■■■□□ 2.03
CPSF6-205ENST00000550075 ITFG1Q8TB96 612 aa27.71■■■□□ 2.03
CPSF6-205ENST00000550075 GPT2Q8TD30 523 aa27.71■■■□□ 2.03
CPSF6-205ENST00000550075 PSMG2Q969U7 264 aa27.71■■■□□ 2.03
CPSF6-205ENST00000550075 PI4K2AQ9BTU6 479 aa27.71■■■□□ 2.03
CPSF6-205ENST00000550075 NIF3L1Q9GZT8 377 aa27.71■■■□□ 2.03
CPSF6-205ENST00000550075 IGSF9Q9P2J2 1179 aa27.71■■■□□ 2.03
CPSF6-205ENST00000550075 LIMD1Q9UGP4 676 aa27.71■■■□□ 2.03
CPSF6-205ENST00000550075 SORCS3Q9UPU3 1222 aa27.71■■■□□ 2.03
CPSF6-205ENST00000550075 NOTCH4Q99466 2003 aa27.7■■■□□ 2.03
CPSF6-205ENST00000550075 MUC3AQ02505 3323 aa27.7■■■□□ 2.03
CPSF6-205ENST00000550075 HCRTO43612 131 aa27.7■■■□□ 2.02
CPSF6-205ENST00000550075 FGF19O95750 216 aa27.7■■■□□ 2.02
CPSF6-205ENST00000550075 LAMP2P13473 410 aa27.7■■■□□ 2.02
CPSF6-205ENST00000550075 LMO2P25791 158 aa27.7■■■□□ 2.02
CPSF6-205ENST00000550075 EPHA5P54756 1037 aa27.7■■■□□ 2.02
CPSF6-205ENST00000550075 FAM171BQ6P995 826 aa27.7■■■□□ 2.02
CPSF6-205ENST00000550075 FGF13Q92913 245 aa27.7■■■□□ 2.02
CPSF6-205ENST00000550075 KHSRPQ92945 711 aaKnown RBP eCLIP27.7■■■□□ 2.024e-8■■■□□ 17.7
CPSF6-205ENST00000550075 NXPE3Q969Y0 559 aa27.7■■■□□ 2.02
CPSF6-205ENST00000550075 SLC35C1Q96A29 364 aa27.7■■■□□ 2.02
CPSF6-205ENST00000550075 MYLPFQ96A32 169 aa27.7■■■□□ 2.02
CPSF6-205ENST00000550075 TNIP3Q96KP6 325 aa27.7■■■□□ 2.02
CPSF6-205ENST00000550075 DNAI2Q9GZS0 605 aa27.7■■■□□ 2.02
CPSF6-205ENST00000550075 DNAJC25Q9H1X3 360 aa27.7■■■□□ 2.02
CPSF6-205ENST00000550075 MYBPHLA2RUH7 354 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 SOAT2O75908 522 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 MICAL2O94851 1124 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 CCDC192P0DO97 292 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 MYL4P12829 197 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 WDR44Q5JSH3 913 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 SPOPLQ6IQ16 392 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 NPAS3Q8IXF0 933 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 MYCBPAPQ8TBZ2 947 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 FAXDC2Q96IV6 333 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 C1QTNF1Q9BXJ1 281 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 SRRTQ9BXP5 876 aaKnown RBP27.69■■■□□ 2.02
CPSF6-205ENST00000550075 CYP3A43Q9HB55 503 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 CRTAC1Q9NQ79 661 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 RAB20Q9NX57 234 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 GDE1Q9NZC3 331 aa27.69■■■□□ 2.02
CPSF6-205ENST00000550075 MAGEC2Q9UBF1 373 aaPredicted RBP27.69■■■□□ 2.02
CPSF6-205ENST00000550075 ATP8B3O60423 1300 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 ATP2C2O75185 946 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 ATF6P18850 670 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 MAGEA11P43364 429 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 ASPAP45381 313 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 RAP1GAPP47736 663 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 CDR1P51861 262 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 CDH8P55286 799 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 NLRP12P59046 1061 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 MTMR3Q13615 1198 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 TPD52L1Q16890 204 aaPredicted RBP27.68■■■□□ 2.02
CPSF6-205ENST00000550075 SLC5A9Q2M3M2 681 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 MDH1BQ5I0G3 518 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 PRSS36Q5K4E3 855 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 MTSS1LQ765P7 747 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 B3GALNT2Q8NCR0 500 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 ING5Q8WYH8 240 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 GCNAQ96QF7 691 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 BCO2Q9BYV7 579 aa27.68■■■□□ 2.02
CPSF6-205ENST00000550075 ASGR2P07307 311 aa27.67■■■□□ 2.02
CPSF6-205ENST00000550075 PTPN1P18031 435 aaKnown RBP27.67■■■□□ 2.02
CPSF6-205ENST00000550075 CYP27A1Q02318 531 aa27.67■■■□□ 2.02
CPSF6-205ENST00000550075 CETN1Q12798 172 aa27.67■■■□□ 2.02
CPSF6-205ENST00000550075 VSTM1Q6UX27 236 aa27.67■■■□□ 2.02
CPSF6-205ENST00000550075 DNAJB7Q7Z6W7 309 aaPredicted RBP27.67■■■□□ 2.02
CPSF6-205ENST00000550075 UNC93AQ86WB7 457 aa27.67■■■□□ 2.02
CPSF6-205ENST00000550075 UBALD2Q8IYN6 164 aa27.67■■■□□ 2.02
CPSF6-205ENST00000550075 HS6ST3Q8IZP7 471 aa27.67■■■□□ 2.02
CPSF6-205ENST00000550075 TTC39CQ8N584 583 aa27.67■■■□□ 2.02
CPSF6-205ENST00000550075 ELMO3Q96BJ8 720 aa27.67■■■□□ 2.02
CPSF6-205ENST00000550075 LPIN3Q9BQK8 851 aa27.67■■■□□ 2.02
CPSF6-205ENST00000550075 CSH1P0DML2 217 aa27.66■■■□□ 2.02
CPSF6-205ENST00000550075 CSH2P0DML3 217 aa27.66■■■□□ 2.02
CPSF6-205ENST00000550075 CEBPBP17676 345 aa27.66■■■□□ 2.02
CPSF6-205ENST00000550075 CYP2F1P24903 491 aa27.66■■■□□ 2.02
CPSF6-205ENST00000550075 MARSP56192 900 aaKnown RBP27.66■■■□□ 2.02
CPSF6-205ENST00000550075 CCDC142Q17RM4 750 aa27.66■■■□□ 2.02
CPSF6-205ENST00000550075 CBWD6Q4V339 395 aa27.66■■■□□ 2.02
CPSF6-205ENST00000550075 CBWD3Q5JTY5 395 aa27.66■■■□□ 2.02
CPSF6-205ENST00000550075 CBWD5Q5RIA9 395 aa27.66■■■□□ 2.02
CPSF6-205ENST00000550075 PCED1BQ96HM7 432 aa27.66■■■□□ 2.02
CPSF6-205ENST00000550075 ELOVL4Q9GZR5 314 aa27.66■■■□□ 2.02
CPSF6-205ENST00000550075 SDCBP2Q9H190 292 aa27.66■■■□□ 2.02
CPSF6-205ENST00000550075 EPHX3Q9H6B9 360 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms