RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 CLUHO75153 1309 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 MAGEB16A2A368 324 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 HACD1B0YJ81 288 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 AP1G2O75843 785 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 INSRRP14616 1297 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 TMPRSS15P98073 1019 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 NAB1Q13506 487 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 TTI2Q6NXR4 508 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 SLC20A1Q8WUM9 679 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 TFB1MQ8WVM0 346 aaKnown RBP9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 SNX19Q92543 992 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 GDAP1L1Q96MZ0 367 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 MCEEQ96PE7 176 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 CINPQ9BW66 212 aaPredicted RBP9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 GOLPH3Q9H4A6 298 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 IRAK4Q9NWZ3 460 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 HDAC6Q9UBN7 1215 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 STK38LQ9Y2H1 464 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 TMEM88BA6NKF7 163 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 DTNBO60941 627 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 IKBKEQ14164 716 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 MUM1Q2TAK8 710 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 C10orf120Q5SQS8 335 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 SMIM5Q71RC9 77 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 SLAIN1Q8ND83 568 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 MCUQ8NE86 351 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 C12orf42Q96LP6 360 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 SERPINB11Q96P15 392 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 SLC4A9Q96Q91 983 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 FAM167BQ9BTA0 163 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 TBC1D13Q9NVG8 400 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 INTS13Q9NVM9 706 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 CYP39A1Q9NYL5 469 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 PSMC3IPQ9P2W1 217 aaPredicted RBP9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 NAGPAQ9UK23 515 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 ONECUT3O60422 494 aaPredicted RBP9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 CASP1P29466 404 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 PPP2R2AP63151 447 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 TSTA3Q13630 321 aaPredicted RBP9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 EXD1Q8NHP7 514 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 FBXO32Q969P5 355 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 VAT1Q99536 393 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 A1CFQ9NQ94 594 aaKnown RBP9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 PRDM10Q9NQV6 1147 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 SMARCAL1Q9NZC9 954 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 PKP3Q9Y446 797 aa9.66□□□□□ -0.86
PPFIA2-216ENST00000549396 RSPH10B2B2RC85 870 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 SPATA31C2B4DYI2 1134 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 KCNN4O15554 427 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 RSPH10BP0C881 870 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 PON1P27169 355 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 FMR1Q06787 632 aaKnown RBP eCLIP9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 SPATA4Q8NEY3 305 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 GLIS2Q9BZE0 524 aaPredicted RBP9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 WWP1Q9H0M0 922 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 DDX4Q9NQI0 724 aaKnown RBP9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 ENTPD7Q9NQZ7 604 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 A0A087WZ62 844 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 CXCR5P32302 372 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 NR2C2P49116 596 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 ZC2HC1CQ53FD0 456 aaPredicted RBP9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 MYLK4Q86YV6 388 aaPredicted RBP9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 C12orf56Q8IXR9 622 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 C18orf25Q96B23 403 aaPredicted RBP9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 MTMR9Q96QG7 549 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 MCCC1Q96RQ3 725 aaPredicted RBP9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 SIK2Q9H0K1 926 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 WDCPQ9H6R7 721 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 RAD54BQ9Y620 910 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 LRRIQ3A6PVS8 624 aaPredicted RBP9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 PHF20L1A8MW92 1017 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 PI4K2BG5E9Z4 385 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 MAFO75444 373 aaPredicted RBP9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 NDUFS3O75489 264 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 DNAJC8O75937 253 aaPredicted RBP9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 HMGCRP04035 888 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 LGALS2P05162 132 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 MAPK8P45983 427 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 PTPN11Q06124 597 aaPredicted RBP9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 CDKAL1Q5VV42 579 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 IL31Q6EBC2 164 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 TAS2R42Q7RTR8 314 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 DDX53Q86TM3 631 aaKnown RBP9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 SENP2Q9HC62 589 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 ARHGEF38Q9NXL2 777 aa9.65□□□□□ -0.86
PPFIA2-216ENST00000549396 CLGNO14967 610 aa9.65□□□□□ -0.87
PPFIA2-216ENST00000549396 FOXN1O15353 648 aa9.65□□□□□ -0.87
PPFIA2-216ENST00000549396 WASHC5Q12768 1159 aa9.65□□□□□ -0.87
PPFIA2-216ENST00000549396 HYIQ5T013 277 aa9.65□□□□□ -0.87
PPFIA2-216ENST00000549396 DSG4Q86SJ6 1040 aa9.65□□□□□ -0.87
PPFIA2-216ENST00000549396 SKA1Q96BD8 255 aa9.65□□□□□ -0.87
PPFIA2-216ENST00000549396 HEMGNQ9BXL5 484 aa9.65□□□□□ -0.87
PPFIA2-216ENST00000549396 PITPNM3Q9BZ71 974 aa9.65□□□□□ -0.87
PPFIA2-216ENST00000549396 HACD3Q9P035 362 aa9.65□□□□□ -0.87
PPFIA2-216ENST00000549396 GIT1Q9Y2X7 761 aa9.65□□□□□ -0.87
PPFIA2-216ENST00000549396 C2CD2Q9Y426 696 aa9.65□□□□□ -0.87
PPFIA2-216ENST00000549396 AK9Q5TCS8 1911 aa9.65□□□□□ -0.87
PPFIA2-216ENST00000549396 STK25O00506 426 aa9.64□□□□□ -0.87
PPFIA2-216ENST00000549396 CAND2O75155 1236 aa9.64□□□□□ -0.87
PPFIA2-216ENST00000549396 ESRRAP11474 423 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms