RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SERTM1A2A2V5 107 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 DRGXA6NNA5 263 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 NCK2O43639 380 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 DAB1O75553 588 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 OFD1O75665 1012 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 EPB41P11171 864 aaKnown RBP5.23□□□□□ -1.57
SCAF11-212ENST00000549162 VDRP11473 427 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 SELPP16109 830 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 IL4RP24394 825 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 VAMP7P51809 220 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 C1QTNF8P60827 252 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 CREB5Q02930 508 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 SQSTM1Q13501 440 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 PNOCQ13519 176 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 LPIN1Q14693 890 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 KARSQ15046 597 aaKnown RBP5.23□□□□□ -1.57
SCAF11-212ENST00000549162 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.23□□□□□ -1.57
SCAF11-212ENST00000549162 AP1ARQ63HQ0 302 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 CHST3Q7LGC8 479 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 FAM228AQ86W67 206 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 PASD1Q8IV76 773 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 TEX26Q8N6G2 289 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 KBTBD7Q8WVZ9 684 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 CAVIN3Q969G5 261 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 VOPP1Q96AW1 172 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 PBKQ96KB5 322 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 ZNF560Q96MR9 790 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 CLIC6Q96NY7 704 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 GCOM2Q9BZD3 368 aaPredicted RBP5.23□□□□□ -1.57
SCAF11-212ENST00000549162 GEMIN8Q9NWZ8 242 aaKnown RBP5.23□□□□□ -1.57
SCAF11-212ENST00000549162 E7ESA3 106 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 DGKIO75912 1065 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 MMP8P22894 467 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 TECP42680 631 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 CASP5P51878 434 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 CACNB3P54284 484 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 DSG1Q02413 1049 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 PLD1Q13393 1074 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 GBP6Q6ZN66 633 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 MED25Q71SY5 747 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 SLC26A9Q7LBE3 791 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 ZBTB8OSQ8IWT0 167 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 ZNF557Q8N988 423 aaPredicted RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 SLC35F5Q8WV83 523 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 CASKIN2Q8WXE0 1202 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 NUP88Q99567 741 aaPredicted RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 TUBGCP2Q9BSJ2 902 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 POLR3FQ9H1D9 316 aaPredicted RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 CARD9Q9H257 536 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 EHD2Q9NZN4 543 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 MTRRQ9UBK8 725 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 PCDHB2Q9Y5E7 798 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 VWA3AA6NCI4 1184 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 C2orf81A6NN90 581 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 HMGB1P1B2RPK0 211 aaPredicted RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 NPIPB8E9PQR5 432 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 XPO1O14980 1071 aaKnown RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 DDX3YO15523 660 aaKnown RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 SART1O43290 800 aaKnown RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 SUN1O94901 812 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 GLULP15104 373 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 JUNDP17535 347 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 CNGA1P29973 690 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 SCTRP47872 440 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 EPHA4P54764 986 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 PTPN5P54829 565 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 SNX16P57768 344 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 UBXN2AP68543 259 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 NAB1Q13506 487 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 RAPGEF1Q13905 1077 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 CBX2Q14781 532 aaPredicted RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 WHAMMP3Q1A5X7 153 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 LETM2Q2VYF4 491 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 SYCP2LQ5T4T6 812 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 CCDC174Q6PII3 467 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 VSTM1Q6UX27 236 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 ECHDC2Q86YB7 292 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 CELF2-AS1Q8N7Q2 184 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 GPATCH11Q8N954 259 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 OR8K1Q8NGG5 319 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 ZSCAN18Q8TBC5 510 aaPredicted RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 IFT74Q96LB3 600 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 HOMER3Q9NSC5 361 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 EURLQ9NYK6 297 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 STRIP2Q9ULQ0 834 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 ARHGEF35A5YM69 484 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 NPC1O15118 1278 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 GREM1O60565 184 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 SNUPNO95149 360 aaKnown RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 IGLV3-19P01714 112 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 GOLGA8HP0CJ92 632 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 TMOD1P28289 359 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 MCM7P33993 719 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 SLC16A2P36021 539 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 ME1P48163 572 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 LHX1P48742 406 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 KRT83P78385 493 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 TCP10Q12799 353 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 TAF1CQ15572 869 aaPredicted RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 PRR16Q569H4 304 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms