RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	SPATA31A3	Q5VYP0	1347 aa		5.2	□□□□□ -1.58
RAP1B-231	ENST00000544639	KPNA5	O15131	536 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	ZKSCAN1	P17029	563 aa	Predicted RBP	5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	KLRC1	P26715	233 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	NPTX2	P47972	431 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	NDUFV1	P49821	464 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	ALDH5A1	P51649	535 aa	Predicted RBP	5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	LOXL3	P58215	753 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	FPGS	Q05932	587 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	ZNF543	Q08ER8	600 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	HDAC1	Q13547	482 aa	Predicted RBP	5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	DAG1	Q14118	895 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	IQCB1	Q15051	598 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	LONRF1	Q17RB8	773 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	PREPL	Q4J6C6	727 aa	Predicted RBP	5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	DCAF12L1	Q5VU92	463 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	IGFL4	Q6B9Z1	124 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	KCNV1	Q6PIU1	500 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	MICALCL	Q6ZW33	695 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	MPP5	Q8N3R9	675 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	PROKR1	Q8TCW9	393 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	PARD3B	Q8TEW8	1205 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	ASB10	Q8WXI3	467 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	SNX19	Q92543	992 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	SLC39A13	Q96H72	371 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	MESP1	Q9BRJ9	268 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	MRI	Q9BWK5	157 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	ZNF341	Q9BYN7	854 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	PNPLA8	Q9NP80	782 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	INTS13	Q9NVM9	706 aa		5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	RGS17	Q9UGC6	210 aa	Predicted RBP	5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
RAP1B-231	ENST00000544639	TRGV11	A0A075B6L2	103 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	NPIPB8	E9PQR5	432 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	PYCARD-AS1	I3L0S3	204 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	NARS	O43776	548 aa	Known RBP	5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	ZNF202	O95125	648 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	IL18RAP	O95256	599 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	CYP2C9	P11712	490 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	XRCC6	P12956	609 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	IL1R1	P14778	569 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	TSHR	P16473	764 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	ITGAL	P20701	1170 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	AK2	P54819	239 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	HTRA4	P83105	476 aa	Predicted RBP	5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	LY6G5C	Q5SRR4	150 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	GPR149	Q86SP6	731 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	GAS2L3	Q86XJ1	694 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	FAM9A	Q8IZU1	332 aa	Predicted RBP	5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	ZC3H10	Q96K80	434 aa	Known RBP	5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	MS4A7	Q9GZW8	240 aa	Predicted RBP	5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	MMRN2	Q9H8L6	949 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	ANKFY1	Q9P2R3	1169 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639	SHOC2	Q9UQ13	582 aa		5.18	□□□□□ -1.58
RAP1B-231	ENST00000544639		A0A0B4J269	797 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	POM121B	A6NF01	834 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	RASA4B	C9J798	803 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	RASA4	O43374	803 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	IFIT2	P09913	472 aa	Known RBP	5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	EGR2	P11161	476 aa	Predicted RBP	5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	GATA3	P23771	443 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	LILRA4	P59901	499 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	TUBB3	Q13509	450 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	LAYN	Q6UX15	382 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	TMEM108	Q6UXF1	575 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	FAM109A	Q8N4B1	249 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	RNF152	Q8N8N0	203 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	SSH3	Q8TE77	659 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	RAPGEF4	Q8WZA2	1011 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	GJA10	Q969M2	543 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	SPSB4	Q96A44	273 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	OSBPL9	Q96SU4	736 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	ELAC2	Q9BQ52	826 aa	Known RBP	5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	BRIP1	Q9BX63	1249 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	PCED1A	Q9H1Q7	454 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	SERHL2	Q9H4I8	314 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	SLITRK6	Q9H5Y7	841 aa		5.17	□□□□□ -1.58
RAP1B-231	ENST00000544639	PIPSL	A2A3N6	862 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639		F5H697	171 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	PARP1	P09874	1014 aa	Known RBP	5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	MAK	P20794	623 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	STT3A	P46977	705 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	PXN	P49023	591 aa	Predicted RBP	5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	RHBDL3	P58872	404 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	PTPA	Q15257	358 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	PLA1A	Q53H76	456 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	RBM20	Q5T481	1227 aa	Known RBP	5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	ABHD17B	Q5VST6	288 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	ZDHHC24	Q6UX98	284 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	DPP9	Q86TI2	863 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	LIX1L	Q8IVB5	337 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	LNX2	Q8N448	690 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	MYD88	Q99836	296 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	COLEC11	Q9BWP8	271 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	STK31	Q9BXU1	1019 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	WDR11	Q9BZH6	1224 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	CHST8	Q9H2A9	424 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	TBCCD1	Q9NVR7	557 aa		5.16	□□□□□ -1.58
RAP1B-231	ENST00000544639	TRIAP1	O43715	76 aa		5.15	□□□□□ -1.59
RAP1B-231	ENST00000544639	MT-ND5	P03915	603 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms